Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181348g00014 ATGAGTGAAGAGAGTAAGACTATTGATCTAACTAAGATCACTCTTAGAGAAACAGATCTTTCTGATGTGGATGATCACATGGTGTGGTCAAGTGATGCAAAGGTGACAGAGTTCTGCACTTGGGGGCCTTACACCAGCAAAGATGAAGCCATACACTATATCAACTGCATACCAAACATATTTTCATGGTATAGAGCCATCTGCCTTGACAATCGAGCAATAGGGTCGGTTTCTGTGATCTTGCAAACAGGTAGATACAGAGAAAAAGTAGCTGAAGTTGGATATATTTTGGCTTCAGAGTACTGGGGGAAAGGGATTGTTACACATGTTCTAAAGCAAGTTGTTGAGATTGTATTCAGCATGTATCCTGAGGTAGAAAGGCTTGAAGCTCTCACTGACAATCAGAATTTGGCATCTCAAAGGGTTTTGGAGAAAGCTGGTTTCCAAAGAGAGGGTGTTCTTAGGAATTATGTGTATGTTAAGGGCAAAAGCAGAGATGTTGCCATATATAGTATTCTTCCAACTGATCTGAAAAACATGAGTTTGAGTGTTGAAGACTTGAAGCTGTAA 570 0.4018 MSEESKTIDLTKITLRETDLSDVDDHMVWSSDAKVTEFCTWGPYTSKDEAIHYINCIPNIFSWYRAICLDNRAIGSVSVILQTGRYREKVAEVGYILASEYWGKGIVTHVLKQVVEIVFSMYPEVERLEALTDNQNLASQRVLEKAGFQREGVLRNYVYVKGKSRDVAIYSILPTDLKNMSLSVEDLKL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181348g00014 189 Pfam Acetyltransferase (GNAT) domain 13 149 IPR000182 GO:0016747
Stsc181348g00014 189 Gene3D - 1 180 - -
Stsc181348g00014 189 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 13 176 IPR000182 GO:0016747
Stsc181348g00014 189 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 12 173 IPR016181 -
Stsc181348g00014 189 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181348g00014 Stsc-Chr181348 69828 70397 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc181348g00014 Acetyltransf_3 3.2e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181348g00014 - - gmx:111043201 202.216