Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181348g00013 ATGATGGAGAGAGACAGAGAAGAGAGGGTTGATTTGGCACAAATCAGCTTTCGAACCCTTGAGCTCTCTGATGTTGATGATGTCCTGGTGTGGACCTCTGATGAAAAAGTAGCCAAGTTTTGCTCTTGGGAGCCTTACAGCAGCAAAGACCAGGGCATTGACTTCATTCAAAATAGAGCATCCGAGTTTCTATGGGGCAAAGCAATATGCCTTAATGACCGTCCTATTGGCTTTATCTCCCTGACCTCGTGTTCTGCAACCGATAAATCGAGGGAGAAATCGGCGGAACTTGGATATGTTCTAGGTTCCAAATACTGGTCCAAAGGGATTATGAGTTATGTTGTAAAACAAGTGATGAAGGTTGCATTCAGCGAGTTCCCACACTTAGATAGGCTTGAAGCTCTAGTTGATGTTGAAAATGTTGGATCTCAGAAGGTGCTGGAGAAGGCTGGTTTCCAAAGGGAGGGAGTCCTAAGGAAATATCTAGTCCTTAAGGGAAAAAGCAGAGACATGGTCATTTTCAGTGTTCTATCAACTGATCTTTGA 546 0.4396 MMERDREERVDLAQISFRTLELSDVDDVLVWTSDEKVAKFCSWEPYSSKDQGIDFIQNRASEFLWGKAICLNDRPIGFISLTSCSATDKSREKSAELGYVLGSKYWSKGIMSYVVKQVMKVAFSEFPHLDRLEALVDVENVGSQKVLEKAGFQREGVLRKYLVLKGKSRDMVIFSVLSTDL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181348g00013 181 Gene3D - 13 179 - -
Stsc181348g00013 181 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 177 IPR016181 -
Stsc181348g00013 181 Pfam Acetyltransferase (GNAT) domain 17 153 IPR000182 GO:0016747
Stsc181348g00013 181 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 15 170 IPR000182 GO:0016747
Stsc181348g00013 181 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181348g00013 Stsc-Chr181348 69003 69548 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc181348g00013 Acetyltransf_3 8.2e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181348g00013 - - gmx:100527055 260.766