Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181348g00005 ATGTTACTAGATACTGGCCGGAATCTGAAAATAGCTGATTTTGGAGTCGCTCGTGTTGAAGCTTTGAATCCAAGTGACATGACTGGTGAAACCGGAACACTTGGATATATGGCACCTGAGGTCCTGGATGGTAAGCCTTACAACAGGAGATGTGATGTGTATAGCTTCGGTATCTGCTTGTGGGAAATTTATTGCTGCGACATGCCTTATCCAAATCTAAGCTTTGCTGATGTATCTTCTTCGGTTGTTCGTCAGAATTTACGACCTGATATTCCGAGATGCTGTCCAAGTGCCATGTCAAATATCATGAAGAGATGCTGGGATGCAAATCCAAACAAACGTCCGGAAATGAAGGATGTGGTGACGATGCTAGAAGCACTGGACACAAGCAAAGGTGGGGGAATGATACCTGAAGATGAGAGTCCAAGTTGCTTCTGCTTTGTCCCAGCCAGAGGTCCCTAA 462 0.4524 MLLDTGRNLKIADFGVARVEALNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPNLSFADVSSSVVRQNLRPDIPRCCPSAMSNIMKRCWDANPNKRPEMKDVVTMLEALDTSKGGGMIPEDESPSCFCFVPARGP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181348g00005 153 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 2 127 - -
Stsc181348g00005 153 SUPERFAMILY Protein kinase-like (PK-like) 2 124 IPR011009 -
Stsc181348g00005 153 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181348g00005 153 Pfam Protein tyrosine and serine/threonine kinase 2 124 IPR001245 GO:0004672|GO:0006468
Stsc181348g00005 153 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181348g00005 Stsc-Chr181348 23036 23740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181348g00005 1 153 MAP Kinase Kinase Kinase AT3G22750 84.967 1.59e-99 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc181348g00005 PK_Tyr_Ser-Thr 3.6e-30 CL0016