Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181346g00021 ATGACGTACTACGAGAAAGTAATAGCGAGTGTGATAAGCTCTGATCACGCATCAGTAGTGTCAATGAACCTCTTCGTAGCACTTCTATGCGCTTGTATCATAATAGGTCACTTGCTTGAGGAGAATCGATGGCTCAATGAATCCATCACCGCCCTTCTTATTGGTCTCTGTACAGGAGTGTTCATATTGCTGAACACTGGAGGAAGAAGCTCTCACATATTCGTTTTCAGTGAAGATCTTTTCTTTATTTACCTTCTTCCACCTATCATTTTCAATGCTGGGTTTCAAGTGAAGAAGAAACAGTTCTTCCGCAATTTCATGACTATAATTCTCTTTGGTGCCGTTGGTGCTATACACTTATTCCAGAAATTGGATCTTGGTTCACTCAAGATTGGAGATTATCTAGCAATTGGAGCAATATTTTCAGCAACAGATTCTGTTTGCACTTTACAGGTGCTTAATCAGGATGAGACACCATTACTGTACAGCCTAGTGTTTGGGGAAGGGGTAGTGAATGATGCTACTTCTGTTGTGCTCCTCAAAGCAATTCAGAATTTTGACCTTTCCCACATTGACTTTGCCACTACTTCAGAATTATTAGCCAATTTCTTATACTTATTAATTGCAAGCACTGTGCTGGGAATTTTAGTTGGATTGCTTAGTGCATACATTATCAAAAATCTCTATTTTGGCAAGTTGATCAGACATTGTACTGATCGTGAGGTTGCTCTTATGATACTGATGGCTTACCTTTCATACATGCTTGCTGAGCTATTTGCTTTGAGTGCTATTCTGACCATGTTCTTCTGCGGCATAGTTATGTCTCACTACACATGGCACAATGTTACAGAAAGTTCAAGAGTCACAACCAAGCATGCTTTTGCAACATTGTCATTCATTGCTGAGATATTTATATTCCTTTATGTTGGTATGGATGCACTGGACATAGAGAAGTGGCGATTTGTAAGCCAAAGTCCTGGAAAATCAGTTGGGATCAGTTCATTGCTTATAGGACTTATCCTAGTTGGAAGAGCAGCCTTTGTTTTCCCTCTCTCATTCTTATCCAATATGTTCAAGAAATCCTCGTATGAGAAGATTAACATGAAGCAACAAATAACGATTTGGTGGTCTGGTCTCATGCGCGGTGCTGTTTCTATAGCACTTGCTTACAACCAGTTTACAAGGCTAGGCCACACTAAGTTGCGCGAGAATGCCATCATGATCACTAGTACCATTTCTGTTGTTCTCTTCAGCACAGTGGTGTTTGGGATGATGACAAAGCCACTTGTGAGGTTACTGCTTCCTTCTTCTAAACACATGATCAGCATACCGTCCCCACCATCGACCCCAAAGACGCTAACAGAGCCACTATTGGGCAATGGACATCATGACTCAGGGCCCAACAATGGTGACAATCTAAATGGGCCTAGCCCAAACCCACTGCGTATGCTTCTGAACTTGTGTAATCGTGGAGTACACCATTATTGGCGCAAGTTTGATGACTCTGTTATGCGTCCTGTATTTGGTGGGAGGGGTTTTGTACCTTACGTTCCAGGTTCACCCCTTGAGCCGGGTCTACCCCGGTGGCATTAA 1593 0.4212 MTYYEKVIASVISSDHASVVSMNLFVALLCACIIIGHLLEENRWLNESITALLIGLCTGVFILLNTGGRSSHIFVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIILFGAVGAIHLFQKLDLGSLKIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLLKAIQNFDLSHIDFATTSELLANFLYLLIASTVLGILVGLLSAYIIKNLYFGKLIRHCTDREVALMILMAYLSYMLAELFALSAILTMFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAEIFIFLYVGMDALDIEKWRFVSQSPGKSVGISSLLIGLILVGRAAFVFPLSFLSNMFKKSSYEKINMKQQITIWWSGLMRGAVSIALAYNQFTRLGHTKLRENAIMITSTISVVLFSTVVFGMMTKPLVRLLLPSSKHMISIPSPPSTPKTLTEPLLGNGHHDSGPNNGDNLNGPSPNPLRMLLNLCNRGVHHYWRKFDDSVMRPVFGGRGFVPYVPGSPLEPGLPRWH 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181346g00021 530 Gene3D - 130 181 - -
Stsc181346g00021 530 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Stsc181346g00021 530 Pfam Sodium/hydrogen exchanger family 26 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc181346g00021 530 PRINTS Na+/H+ exchanger signature 109 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc181346g00021 530 PRINTS Na+/H+ exchanger signature 94 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc181346g00021 530 PRINTS Na+/H+ exchanger signature 80 91 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc181346g00021 530 MobiDBLite consensus disorder prediction 443 477 - -
Stsc181346g00021 530 PANTHER SODIUM/HYDROGEN EXCHANGER 14 508 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181346g00021 Stsc-Chr181346 104369 107876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181346g00021 10 523 Antiporters AT3G05030 71.591 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181346g00021 - - ccaj:109808409 848.58