Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181338g00027 AAAAACATGTTAGGGAGAAAGGTGGTATCATTGAAGAAACTAGCAAAAAAAGTGAAGGTTGTTGGTGTTGGAGCTGAAAAAGAAGCTTCTTCATACAATGAATGTTTGCTAAAAGGGTATGAAGAAGAAGAATCATCATCACCACCATCAAACACAACAAGAACAACAACACCAACAGGTTATTTTGCAATCTATGTTGGTGAAGAGAGGCAGAGATATGTTGTTCCAACAAGCTACCTCAATCACCCTTTATTCAAGATCTTGCTTGAGAAATCACACAATGAATTTGGATTCTCACAGAGTAATGGCCTTATTCTTCCATGTAGAGTTTCCACATTTCAGGAGGTGGTTAATGCTATAGAATGCAACAATGGCAAGTTTGACTTGGGCAAGAATTTTGAAGATTTTCTATAA 414 0.3671 KNMLGRKVVSLKKLAKKVKVVGVGAEKEASSYNECLLKGYEEEESSSPPSNTTRTTTPTGYFAIYVGEERQRYVVPTSYLNHPLFKILLEKSHNEFGFSQSNGLILPCRVSTFQEVVNAIECNNGKFDLGKNFEDFL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181338g00027 137 Pfam Auxin responsive protein 34 119 IPR003676 GO:0009733
Stsc181338g00027 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 116 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181338g00027 Stsc-Chr181338 120558 121084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181338g00027 6 123 Calmodulin-binding Proteins AT5G20810 37.681 1.95e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181338g00027 K14488 - gmx:100790208 167.933