Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181338g00012 ATGGCTGGAAAACTTTATGGTGGAGCTTACCTCTCTTCCTCTGTTGATGCTGCTTTAGACAACCTGTCTAGGATTCTTGAACATGATTCTGTCCTTAATGGAAACGATTCTACAAGAGAGTTGCTTGAAAGGTTGGAGAAAAGTCTGTTTGATGTTGCTCCTGTGCTTGATGATGCTGAGCTCAAGCAGTTCACTGACAAGAGAGTCAAGAAGTGGCTCGTTGATCTCCAAGATGCTCTCTATTTCGCTGATGACTTCCTTGATGAACTCTCCACTAAAATGGCCACTTCCACTCCAAGGGATCCAGGTATCTCTTCTTACTGTTCTTCTCTTGTTGATTCATACATTGAAGGTAATGGTGACCTGGAGTTCATAGTTAGAAGAATAGAGTCTGTTGTAGCACGTAAAACTTATCTTCGTCTGAAGGAGACTGCCAAGGTGGACATGTCATGGAGAACTCCATCCACACATCTCGTTGTAAGTTCTAACATATTTGGTCGGGACAAAGACAAGGACGAGATAATCAAATTGTTGTTTGACGATACTTGTGATGCTGTATCACCTGTTACTGTGATCCCCATTTGGGGTATGGGTGGAATAGGAAAAACTACTCTGGCTCAACTGGTTTACAGTGATGCTAAAGTGGTGGAAAAATTTGATACTAGGACATGGGTGTGTGTTGCTGAAAATTTTGATCCCGTTGGCCTTACAAGGGCTATAGTGGAGAAAATAACTTCCCTTTCGTGTGACAGGGATGATTTTGATTCACTTCAAAGTCGTTTAAAAGAAACGATGAGAGGAAAGACATTCTTAGTTGTTCTAGATGATGTCTGGGAGGATCGAAAAGATATGTGGGAGGATCTTCTAAAACCTTTTTGTTACGGAAATCGTGGAAGTAAAATTCTTTTAACAACCCGTAGTGAAAAGGTGGCTTCTGTGGTGGCAACTACTAAACCACATTACCAACTGAGTTTATTGTCGGATGAAGATTGTTGGTTAGTGTTTTTAAAACAGGCACATCTTTCTGCTGACTCTATCAATTCAACTCTTGAAAAAGTCGGCAAAGATATCATCAAGAAGTGTGGCGGATTGCCCTTGGCAGTACAAGCCCTGGGAGGCTTATTACGTGGAAATTCTAGTGTCACGTATTGGAATCAGATATTGAAGAGTGAGATTTGGGAATTTTCCCATGACAAGATCAAAGTTGTTCCAGCATTAACAATTAGTTATTATTACTTACCTTCATGTTTAAAAAAGTGCTTTGTTTATTGTTCTTTGTATCCCAAGGATTATGAGTTTTCTAAATGTGGGTTGATCTTGTTATGGATGGCGGAGAATTTTTTACAACCAGTAGCAAGAAAGACTCTAGAAGAAGTCGGTGATGAATATTTTGATGAATTAATTGCAAGATCATTTTTGCTACCTCACAGCACTCATGAAAATGAATTTGTGATGCATGATCTCATGCATGATTTGGCAATGATCTTTGCTGGAGAGTTCTATTTCAGGGCTGAAGAGCCCAAGAATGATGTTGAGAATGATATCAAAACTCGTCATTTGTCACTAATTGTAAAAGGCAATTATCCAATCTCAAATCTTTTGAAAGTTTGTGACAGAATGAAACATACGAGGACATTTCTTGAAATTGATTTGTGGCGACGTTTGCCATTTAACATGGGAAACTCACCTTGTATCTTGTCACAGTGGAAGTACCTAAGATCTTTATCGTTCAAATGCTTTCCTCTTGAGTCACTACTTGATTCAATAGGCGAGTTGATTCATTTGCGTTACTTGGATCTCTCTTTGACCTTTATTGTGACACTGCCAGAGTCGTTGGGTAACTTGTACAATCTGCAGACCTTAAAGCTATGTAATTGTCGCATGTTGAAAATGCTTCCTGTTAGCATGCAAGATCTTGTAAATTTACGCCATCTTGATATTAGATGGACTTGTTTGCACGAGATGCCGAAAAGCTTGAGCAAATTGCAAAGTTTGCAATTTTTAAGCAACTATGCTGTTGGGAAGCATGAAGGGAACAATATTAAAGAATTGGGAGCACTTGTAAATCTACACCATGCAATTGACATTTCCCATTTGGAGAATGTGGTCGACAGTAGCGAAGCTTCGGAGGCAAGAATGTCTGAGAAAGATGGCATTGATTCTTTGGTGTTGCGTTGGTCTTCGGATGAAGACAAGAATATGGTTGATTCCCGAATCGAAGATGACATACTAGACAAGTTACGACCTCACCATAATTTGAAAGAACTAGAAATCCAGGGATACAGTGGTACAAGATTTCCAGATTGGTTGGGAAATTCTTCCTACCACCACATCACCAAAGTATCTCTCTCTGGTTGCAGGAATTGTCGTACGCTTCCATCACTTGGGCAGTTGCCCTCTTTGAAGCACCTTAAAATTTCAGGTTTTGAAAGTGTGGAGACTGTAGGTGATGAGTTTTACCGAAATGATGAATCTTGTTTGGACACTCCATTTCCAATGCTTGAAACTCTTAGGATTGGCTTCATGCCTTGCTGGAAGGAGTGGCGCTGTTCATTGGAGTTCAATGCATTGCCTCGACTCAGGGAGCTTGCCATAGGGGAGTGTCCGATGTTGAGAGGAGATTTGCCCAATCAACTACCATCTTTGCAATCACTTGAGATTCACAATTGCGAGCAGCTCAGTTGTTGTTGTCTTCCAAGACCTCCTGCTGTTACTTCTTTAAGCAAAAAGGGCAGCAATGAAGTGAGAGTTTGGGAGCTTCCTCCTTTATTAAGTGTTCTGAAAATTAGAGGAGAGCATCAAGTGGAGTCCATGGTTGAGGTCATTAACCACACGCAACTGACTTGTCTCACGTCCTTAATCATCTCAGGTTGTTCCTCCCACTTGTCGTTTCCAGTGAGTGCTATTCCCGCATCACTCGAGAAGTTGGAGATATCTGGTTGCAGCAAATTAGAATTTCAAATGGATGGCCAACATCACTCGCTGCAGGAACTATTGATAAGGAGCAGCTGTGATTCAGTTACATCCTTCTCGTTGGATTCCTTTCCAAAACTCGTGGATGCTTTTATCTTGAGTTTTAAAAAGATGGAGACTCTTGTGGTGTCACGCTCTCTTTCATGTCTCCGTTATTTAAGTATCCAGAATTGCGGGAGTTTGAAATCCGTGTCGACACTATGGATGTTAGCACCTCAGTTAGAAGACCTCATGTTACTGGGTTGCCCAAAGATTGAATTGTCTGCTACAGGGGATCCACACAGTAACCTGAGAGTTCTTTGGATCAGCTACTACGAGAAACTGGTCAGCTCCGCAGCATTCATGAATTCCCAATTTCATGGGCTTACTCGTCTTGTCATATATAATTATGAAATTGACGAGAGTGAGAGTGTGAAGTGCCTCCCAAAGGAAGGTTTGTTGCCTGCCTCACTTGAGAATCTGGAACTGAAATCCATTGGAAGTGTGGAGACGTTGGAATGCAAGGGACTTGGCCACCTCACCTCCATCAAAGAGTTAACCATTGAGAATTGTCCCAAGTTGGAGAATATCGAGGGAGAAAAGCTGCCTGCCTCTCTATTACGACTCAAAATCAATTATACCCCTTTGTTGGGTAAAAAGTGCGAGATTAAGGACCCTCAAGTTTGGCCCAAAATTTCCCACATCCGCAACATTCAAGTTGATGGAACATGGATCTGA 3690 0.4136 MAGKLYGGAYLSSSVDAALDNLSRILEHDSVLNGNDSTRELLERLEKSLFDVAPVLDDAELKQFTDKRVKKWLVDLQDALYFADDFLDELSTKMATSTPRDPGISSYCSSLVDSYIEGNGDLEFIVRRIESVVARKTYLRLKETAKVDMSWRTPSTHLVVSSNIFGRDKDKDEIIKLLFDDTCDAVSPVTVIPIWGMGGIGKTTLAQLVYSDAKVVEKFDTRTWVCVAENFDPVGLTRAIVEKITSLSCDRDDFDSLQSRLKETMRGKTFLVVLDDVWEDRKDMWEDLLKPFCYGNRGSKILLTTRSEKVASVVATTKPHYQLSLLSDEDCWLVFLKQAHLSADSINSTLEKVGKDIIKKCGGLPLAVQALGGLLRGNSSVTYWNQILKSEIWEFSHDKIKVVPALTISYYYLPSCLKKCFVYCSLYPKDYEFSKCGLILLWMAENFLQPVARKTLEEVGDEYFDELIARSFLLPHSTHENEFVMHDLMHDLAMIFAGEFYFRAEEPKNDVENDIKTRHLSLIVKGNYPISNLLKVCDRMKHTRTFLEIDLWRRLPFNMGNSPCILSQWKYLRSLSFKCFPLESLLDSIGELIHLRYLDLSLTFIVTLPESLGNLYNLQTLKLCNCRMLKMLPVSMQDLVNLRHLDIRWTCLHEMPKSLSKLQSLQFLSNYAVGKHEGNNIKELGALVNLHHAIDISHLENVVDSSEASEARMSEKDGIDSLVLRWSSDEDKNMVDSRIEDDILDKLRPHHNLKELEIQGYSGTRFPDWLGNSSYHHITKVSLSGCRNCRTLPSLGQLPSLKHLKISGFESVETVGDEFYRNDESCLDTPFPMLETLRIGFMPCWKEWRCSLEFNALPRLRELAIGECPMLRGDLPNQLPSLQSLEIHNCEQLSCCCLPRPPAVTSLSKKGSNEVRVWELPPLLSVLKIRGEHQVESMVEVINHTQLTCLTSLIISGCSSHLSFPVSAIPASLEKLEISGCSKLEFQMDGQHHSLQELLIRSSCDSVTSFSLDSFPKLVDAFILSFKKMETLVVSRSLSCLRYLSIQNCGSLKSVSTLWMLAPQLEDLMLLGCPKIELSATGDPHSNLRVLWISYYEKLVSSAAFMNSQFHGLTRLVIYNYEIDESESVKCLPKEGLLPASLENLELKSIGSVETLECKGLGHLTSIKELTIENCPKLENIEGEKLPASLLRLKINYTPLLGKKCEIKDPQVWPKISHIRNIQVDGTWI 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181338g00012 1229 Gene3D - 149 319 IPR027417 -
Stsc181338g00012 1229 FunFam Probable disease resistance protein At1g63360 410 495 - -
Stsc181338g00012 1229 PANTHER DISEASE RESISTANCE PROTEIN RP 48 892 IPR044974 GO:0006952
Stsc181338g00012 1229 SUPERFAMILY L domain-like 907 1216 - -
Stsc181338g00012 1229 Gene3D Ribonuclease Inhibitor 918 1229 IPR032675 -
Stsc181338g00012 1229 Gene3D Ribonuclease Inhibitor 531 917 IPR032675 -
Stsc181338g00012 1229 Gene3D - 409 494 IPR036388 -
Stsc181338g00012 1229 SUPERFAMILY L domain-like 484 906 - -
Stsc181338g00012 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 424 IPR027417 -
Stsc181338g00012 1229 Gene3D - 14 117 - -
Stsc181338g00012 1229 FunFam Probable disease resistance protein At1g61300 150 319 - -
Stsc181338g00012 1229 PRINTS Disease resistance protein signature 361 375 - -
Stsc181338g00012 1229 PRINTS Disease resistance protein signature 877 893 - -
Stsc181338g00012 1229 PRINTS Disease resistance protein signature 264 278 - -
Stsc181338g00012 1229 PRINTS Disease resistance protein signature 191 206 - -
Stsc181338g00012 1229 Gene3D - 325 408 IPR042197 -
Stsc181338g00012 1229 Pfam NB-ARC domain 168 390 IPR002182 GO:0043531
Stsc181338g00012 1229 Pfam Rx N-terminal domain 15 97 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181338g00012 Stsc-Chr181338 54423 58112 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181338g00012 189 377 WRKY Transcription Factor Family AT5G45050 26.943 2.51e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181338g00012 - - aip:107626318 1569.67