Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181337g00020 ATGATTTCAGTTAGTGGAGTAGTGTATGCATGTGATGATGCTGAAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCAAAAGTTCCTGAAAGTGATTTTACAACCCTACCTAATGGCTTGAAGTACTATGATTTGAAGGTTGGGCAAGGAGCCGAGGCTGTAAAAGGATCTCGTGTCGCAGTTCACTATGTTGCTAAGTGGAGAGGTATCACATTTATGACTAGTAGACAAGGAATGGGTGTTGGAGGAGGAACGCCCTATGGATTTGATGTTGGAGAATCAGAGAGGGGAAATGTTCTTAAAGGGTTGGATTTAGGTGTACAAGGCATGAGAGTTGGAGGCCAGAGATTACTAATTGTTCCTCCTGAACTTGCCTATGGAAAGAAGGGAATCCAAGAAATACCTCCAAATGCAACAATAGAGGTGGATGTTGAACTGCTTTCAATCAAACAAAGTCCATTCGGGACTGCTGTAAAGATCGTTGAAGGTTAA 495 0.4263 MISVSGVVYACDDAEAVSTSRRALRGAKVPESDFTTLPNGLKYYDLKVGQGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESERGNVLKGLDLGVQGMRVGGQRLLIVPPELAYGKKGIQEIPPNATIEVDVELLSIKQSPFGTAVKIVEG 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181337g00020 164 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 30 159 - -
Stsc181337g00020 164 SUPERFAMILY FKBP-like 28 151 - -
Stsc181337g00020 164 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 53 148 IPR001179 GO:0003755
Stsc181337g00020 164 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 57 151 IPR001179 GO:0003755
Stsc181337g00020 164 Gene3D - 12 158 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181337g00020 Stsc-Chr181337 101199 102830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181337g00020 46 150 Calmodulin-binding Proteins AT5G48570 31.818 2.20e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181337g00020 - - ini:109151731 296.204