Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181337g00009 ATGCCTTGTTCTTCTTCTTCCTTACTTTCTCTCTCATCTTTCTCTCTCTTCACTCCCCATACAAAACTGAAGCAACCACCACCACCACCACCACCTTATCCACACTCTCGCCGCTTCTCACTCAAATCCTCCATTGACAAAAACACCACCACCACCAGCAACAACAACAAAACAAGCTCTTGGGTGAGTCCAGATTGGCTGACATCACTCTCAAGGTCCCTGACAAACGGAAAAGATGATGATTCTGGAATCCCCATAGCAAGTGCAAAGCTTGATGATGTTTCTGACCTTCTTGGTGGTGCACTCTTCTTGCCACTCTTCAAGTGGATGAAAGAGAATGGACCCATTTACCGTTTGGCTGCTGGCCCTAGAAACTTTGTTGTTGTTAGTGACCCTGCCATTGCCAAGCATGTCCTCAAGAACTATGGTAAATATGCTAAGGGTCTTGTTGCTGAGGTCTCTGAGTTTCTCTTTGGCTCTGGTTTTGCCATTGCTGAAGGTCCCCTCTGGACGGCCAGGCGCAGGGCTGTGGTTCCTTCTCTTCACAAGCGATACTTGTCGATTATAGTCGACAGGGTATTTTGTAGATGTGCTGAGAGATTAGTGGAGAAGCTACAACCTGATGCTCTCAATGGAACTGCAGTTAACATGGAGGACAAGTTTTCGCAGTTGACTCTTGATGTTATCGGTTTATCTGTGTTCAACTACAATTTCGATTCGCTGAATTCCAACAGTCCTGTTATCGAAGCTGTTTACACTGCATTGAAAGAGGCAGAGGCTCGGTCTACTGATCTTTTGCCATATTGGAAGATTATCCCCAGACAAATAAAGGCTGAAAAGGCCGTTAGCGTTATCAGGACAACTGTCGAAGATCTTATAAAACAATGTAAAGAAATCGTAGATGCTGAGGGTGAAAGAATTGATGATGAAGAATATGTGAATGATGCTGATCCTAGTATTCTCCGGTTCTTGCTTGCCAGCAGAGAAGAGGTTTCGAGTGTGCAATTACGGGATGATCTTCTGTCACTATTAGTTGCTGGTCATGAGACCACTGGTTCAGTGTTGACCTGGACCCTTTATCTTCTAAGTAAGGATTCTTCCGCATTGGCGAAAGCACAAGAAGAGGTTGATAGAGTTTTACAGGGAAGACGTCCTGCCTATGAAGATATTAAAGATCTTAAGTATTTGACACGCTGCATTATTGAGTCACTCCGTCTCTATCCCCATCCTCCAGTGTTGATAAGAAGAGCTTCAGTTCCTGATGAACTTCCTGGTTCTTACAAAGTCAATGCTGGTCAAGATATTATGATTTCTGTGTACAACATACATCATTCTTCTGAGGTTTGGGACAGGGCTGAAGAGTTTTTGCCAGAAAGATTCGACATGGATGGCCCGGTGCCGAATGAGACAAACACAGATTTCAGATTCATTCCGTTCAGTGGAGGCCCCCGAAAATGCGTCGGGGACCAGTTTGCATTATTGGAAGCCATAGTTGCTCTTGCAATCTTTCTACAGAACATGAACTTTGAGCTGGTTCCTGATCAGAATATCAGTATGACTACAGGAGCAACAATACATACAACAAATGGTTTGTACATGAAACTGAGCAAACGGTAG 1617 0.4422 MPCSSSSLLSLSSFSLFTPHTKLKQPPPPPPPYPHSRRFSLKSSIDKNTTTTSNNNKTSSWVSPDWLTSLSRSLTNGKDDDSGIPIASAKLDDVSDLLGGALFLPLFKWMKENGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYAKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHKRYLSIIVDRVFCRCAERLVEKLQPDALNGTAVNMEDKFSQLTLDVIGLSVFNYNFDSLNSNSPVIEAVYTALKEAEARSTDLLPYWKIIPRQIKAEKAVSVIRTTVEDLIKQCKEIVDAEGERIDDEEYVNDADPSILRFLLASREEVSSVQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSALAKAQEEVDRVLQGRRPAYEDIKDLKYLTRCIIESLRLYPHPPVLIRRASVPDELPGSYKVNAGQDIMISVYNIHHSSEVWDRAEEFLPERFDMDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQNMNFELVPDQNISMTTGATIHTTNGLYMKLSKR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181337g00009 538 PRINTS E-class P450 group I signature 224 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 Pfam Cytochrome P450 106 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 SUPERFAMILY Cytochrome P450 98 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 MobiDBLite consensus disorder prediction 20 60 - -
Stsc181337g00009 538 PANTHER CYTOCHROME P450 FAMILY 4 109 538 - -
Stsc181337g00009 538 MobiDBLite consensus disorder prediction 22 36 - -
Stsc181337g00009 538 MobiDBLite consensus disorder prediction 43 60 - -
Stsc181337g00009 538 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 CDD CYP97 104 532 - -
Stsc181337g00009 538 Gene3D Cytochrome P450 85 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181337g00009 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181337g00009 Stsc-Chr181337 43333 47097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181337g00009 39 538 Cytochrome P450 AT3G53130 82.446 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181337g00009 K09837 - gmx:100797221 900.582