Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181335g00031 ATGGTGATGGGTTTGGAAAAGGATCCTCATGTGTTTTTCGATGTCTCAATTGGTGGGGACCCTGTGGGAAGAATTGTAATACAGCTTTTTGCTGGTGTTGTTCCCAAGACAGCTGAGAATTTTCGGGCACTCTGTACAGGTGAGAAGGGTATTGGTGCATCCACTGCTAAACCTTTGCATTATAAAGGAACAAGTTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGTAATGGCACTGGTGGGGAAAGTATATATGGAGGGAAATTTGCAGATGAAAATTTCAAACTATCACATGATGGACCTGGTGTTCTTTCCATGGCTAATAGTGGAGCTAACACAAATGGGTCTCAGTTCCTTATTACCTTTAAGCGCCAACCCCATCTTGATGGAAAACATGTCGTTTTTGGAAAAGTTGTCATGGGAATGGACATTCTGAAGAAAATTGAGCTGGTGGGATCTTCTGATGGGAAAACTGTCCAGCCGGTCAAAATTATTGATTGTGGTGAAGTTTCAGAGACAAAAAATCAGCATGCTGTTGAGAAGGAAAAAGGGAAAAAGGGAAAATCAGGGAAATCCCTATCTCCTGGTGATAGTTCTGGCAAAAGATCAAGAGGTAAAAGGAAAAAAACTTCAAAAGACACCAAGAGAAGGAAGAAGAGATACTCCACATCAGATAGTGATAATAGTAGCAGTGACAGTTATTCCTCAGATTCTGAGTCAGATTCAGATTCCGAATCAGACCCGTCCGATTCTGATTCAAGTTCCTCAAGTTATGGGAAGCATCGGAAGAGGAAGGGGAATAAGCGCAAGCATGAGAAGAGGAGGAGAAAGGGACAAAAGCAGAGAAGGAGCCAGCACACTAGAGGTAGAAGATCAAGACACAAGTCCAAGTGGAGTTCAGAGGATTCAAGTGATACAGAAAGTGAGAGTTCTACTGCTAGTGGCAGTAGTTCTGGTGAGGAGAAAGCTGATCGCCGTGGCCCTAGACGTAAAGCACTTGCTGACAATAAACCACAAAGGAATCTTGACACAGGAAAGCAATCTTCTAGCCCACCTCTAAAAAGTAAAAACATTTCAGAACAAGGGATGGACACTAAGGCTAGAAGAACTGTGGACAAGGAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGATGAACTTCTGAATAATGGGCATGATACTCAGGCCAAACTTAATAAACCTTCTACGAAACAGTCCCATTCAGATGATTCAGATCAAAATAGAGGTGCGAGTCCTGGAAGAAGTGCTGGTCAAAAAGCATCTGAACTTGCAGCAACCAAAAACCAGGGTTTTTCGAGAAGTCCTTCACCACATGGTATGCCTAAGCGTATAAAAAAAGGACGTGGCTTTACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCCCCCGAGCGTTCTCCCCGTGCATATCGTTATGGTGATAGAAATATGAGAAGGAACTTTGATAGAAACTCAAGCTACAGAAGATATTCTGAGCGCTCCCCTCCAAGGCGATTTCGGAGCCCACCAAGGGGTGGGAACCATCCAAGAAACCAAGGTAGAAGAAGTCGGAGTAGAAGCATCTCTCGCAGTCCTGTGCACGGCCGTTTTAGAGACCATGGTCGCAGCCGGAGTCCAGTACGCAGTCCTAGTCCTGAAGACAGAAGGCCTTCTTCAATAAGTGACAGATTGAAATCCCGACTTGGTCCTCGAAACAATCAACCCTCTCCGGACAAAGGCAGGTCAAGGTCCAATTCTAGGAGTAACAGATCTTCTGGTTCCAGATCCCCTGATGCCACACCACCAAGACGATATGATAAAAGGACATCTCGAAGCAGTTCCAGATCGAGCTCTCTGTCTGGACAACAGGGGTTAGTTTCTTATGGAGATGCAAGTCCTGATTCTGAGGCAAGGTAG 1947 0.4448 MVMGLEKDPHVFFDVSIGGDPVGRIVIQLFAGVVPKTAENFRALCTGEKGIGASTAKPLHYKGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLSHDGPGVLSMANSGANTNGSQFLITFKRQPHLDGKHVVFGKVVMGMDILKKIELVGSSDGKTVQPVKIIDCGEVSETKNQHAVEKEKGKKGKSGKSLSPGDSSGKRSRGKRKKTSKDTKRRKKRYSTSDSDNSSSDSYSSDSESDSDSESDPSDSDSSSSSYGKHRKRKGNKRKHEKRRRKGQKQRRSQHTRGRRSRHKSKWSSEDSSDTESESSTASGSSSGEEKADRRGPRRKALADNKPQRNLDTGKQSSSPPLKSKNISEQGMDTKARRTVDKESHEEGELSPENDELLNNGHDTQAKLNKPSTKQSHSDDSDQNRGASPGRSAGQKASELAATKNQGFSRSPSPHGMPKRIKKGRGFTERYAFARRYRTPSPERSPRAYRYGDRNMRRNFDRNSSYRRYSERSPPRRFRSPPRGGNHPRNQGRRSRSRSISRSPVHGRFRDHGRSRSPVRSPSPEDRRPSSISDRLKSRLGPRNNQPSPDKGRSRSNSRSNRSSGSRSPDATPPRRYDKRTSRSSSRSSSLSGQQGLVSYGDASPDSEAR 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 460 516 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 180 648 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 368 390 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 267 301 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 542 572 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 326 344 - -
Stsc181335g00031 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 124 IPR002130 GO:0000413|GO:0003755
Stsc181335g00031 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 78 IPR002130 GO:0000413|GO:0003755
Stsc181335g00031 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 29 44 IPR002130 GO:0000413|GO:0003755
Stsc181335g00031 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 IPR002130 GO:0000413|GO:0003755
Stsc181335g00031 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 136 IPR002130 GO:0000413|GO:0003755
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 575 608 - -
Stsc181335g00031 648 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 14 175 IPR002130 GO:0000413|GO:0003755
Stsc181335g00031 648 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 12 176 IPR002130 GO:0000413|GO:0003755
Stsc181335g00031 648 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 3 184 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 527 541 - -
Stsc181335g00031 648 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 61 78 IPR020892 GO:0003755|GO:0006457
Stsc181335g00031 648 SUPERFAMILY Cyclophilin-like 8 180 IPR029000 -
Stsc181335g00031 648 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 11 177 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 436 450 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 395 410 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 347 367 - -
Stsc181335g00031 648 CDD cyclophilin_ABH_like 9 175 - -
Stsc181335g00031 648 Gene3D - 3 185 IPR029000 -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 180 197 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 209 224 - -
Stsc181335g00031 648 MobiDBLite consensus disorder prediction 622 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181335g00031 Stsc-Chr181335 113969 119125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181335g00031 23 173 U-box Gene Family AT5G67530 45.752 5.79e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181335g00031 K09566 - gmx:100791082 706.057