Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181335g00029 ATGGCACGTGACCACCACAACCTCGAGAAACACCTTCAGAAGCAGATGGGTTGCATGGCCGGCTTCTTTCACATCTTCGACCGCCACCACATCCTCGCCGGAAAACGCATCTACTCCGCCAAAACACTCCCTCCCGAAAGTGACACCTCACCGGAGCCGGAAAACAACAACGCTGTGTCTGACGTCGAATCCATACACGCACCGTCCACCCCAGAGGCGGAAGCTACAACTCCTTCACCCAAGACTCCCGTTCCCCTTCCGGCATTCGAAGGCACGCGGTCTCCATGGAAGTTCTCTAGAGAGGCTCCCAGGCTTTCGTTGGATAGCAGGGCCGTTGTTGACGCAAAAGGAGCGCTTCACCCGAGGCAGATCCCAACCAACTACAAAAACAACACGCCAGAATTGCCTGCTGCTGACCTGGACAAGCAGCGGCGATCCACCAGCGTCATTGCAAGGCTCATGGGATTGGACGAGCCTGAACCCGAGCTGCGAAGATCAGCTTCAGAGTCTAGGCTTCCCAGAGATCTTAACCTGAAGCAGTACCGTTTCTTCGATCCTAACGGTTTTCAGTTAAAGCAGTTAAGCTCTCGTGACGGTAATAAGGCTGATAATTTTGTTGATAACAATGGATTTTCCAAACGCAATGGCAGATTCTCAGATCCAAAAGCTTTCGCCGTACGGAACACCAAGGCAGAGCCAGCCAGAGCAAATATCAATATCAGGAACAGGGGAGCCGTACAGAAGAAGAGCTTCTACGATGCCGCTGACATTTTCCCTGATGGCGACATCGATCGGAGTCTGAAGATGCGACTCATCGATGAGCCTTCAAAGGATCTAGACACGCTCAAGCAAATCCTTGAGGCTGTGCAACTCAAAGGCCTCCTCCATTCCCGAAACTACGACACTGCCATTAACAGCCACCGGAACATTCTCTTCCAAGGAAACGATTCTCCTGTAGTGCTGATGAAGCCAGGGAGGCCTTACGGTTCAAACTTGTACCGCTTCGGGAATGATTCTCACAGTCCCCGGGCTCGTCGAAACAATGAAGTACTGTTTAGCCCGAGGCGCGAAACTGATAATGGCAACGTGAGGGCTGTGTCTCAGGCCCGGGCCAGAAGTCTCTGCTCTCCCACACGCGGTGAGAGTGAAATGAGGAGCCCGAACCGGATGCGGAAGGTGAATGGTGGCTCTGATGCCGTTAACAGAAGAGTTGCTCCGGTTAGAGTTAGGTCGAGGATTGTGGGAGCTGAGCAGAACGTGACGAACCGATCGCCGAGAATGAGAAGAGGAAGTCTCCAAAAGGAAGAGAAAGCGGCAGAGGATGCATATTCGACGGTGTCAGAGAGCAGTTTCAGCACTTACTCAAACACTGATACAGAGAGGTTGAAAATGGAGGAGAAGAGGGAAGGGAGGAGTCTACTGGAGAGGTGCGATAAGCTGCTGAACAGCATAGCGGAGATAACGGGATCAGGGCAGCAGGGAGAGTCAGAACAACCAAGTCCGGTATCGGTTCTGGACTCGTCGTTTTACAAGGAGGAGGAGGAGCCATCCCCGGTGATGAAACGGTGCATTGATTACAAAGAGCAAGCAGGGGATTCAGAAGATGACATGTGGAATGCAGCCTTGTGGTGCACCCACGACACCGATTTCGTATACATTTCGGAGATACTCCGTGCTTGCAACCACTTCCCGGAGGACAGCGACGTCTTCCTTCTACTCGAGAAGCAGCAGGGGAACGACACCTCCAAGCCCTCCACGCTACGGAGACGCTTGATCTTCGACACCGTTCGAGAAATCCTCCACCGAAACCGCCGCCTTCCTCCCTGGAAAGAGGCCTCCTGGGCGGACGACACGCCACTCTTGCGCCGGATTTGGACCGAGTTTCGTAGGATCCGAGGGAGGGAAGAGGAGGAGGAGGTGCCTGAGGAGCTGTTCGAGGTGATATGCGGTGTGCTTAGAAAAGATGTGGCGGAGGAAGGGGTGGACGAGTGGGGAGAGCGGCACGTGGAGATGGGAGATGTGGTGTTAGACATGGAGCGCCTGGTGTTCAAGGACCTCATTGTTGAAACCATTAGAGAGCTTGCTTGGTCTAGGAAACCTCAATTCAACAACAACAGATCATCAGTCTCTGCCTATCGCAGGAAGTTGTTGTTTTGA 2157 0.5327 MARDHHNLEKHLQKQMGCMAGFFHIFDRHHILAGKRIYSAKTLPPESDTSPEPENNNAVSDVESIHAPSTPEAEATTPSPKTPVPLPAFEGTRSPWKFSREAPRLSLDSRAVVDAKGALHPRQIPTNYKNNTPELPAADLDKQRRSTSVIARLMGLDEPEPELRRSASESRLPRDLNLKQYRFFDPNGFQLKQLSSRDGNKADNFVDNNGFSKRNGRFSDPKAFAVRNTKAEPARANINIRNRGAVQKKSFYDAADIFPDGDIDRSLKMRLIDEPSKDLDTLKQILEAVQLKGLLHSRNYDTAINSHRNILFQGNDSPVVLMKPGRPYGSNLYRFGNDSHSPRARRNNEVLFSPRRETDNGNVRAVSQARARSLCSPTRGESEMRSPNRMRKVNGGSDAVNRRVAPVRVRSRIVGAEQNVTNRSPRMRRGSLQKEEKAAEDAYSTVSESSFSTYSNTDTERLKMEEKREGRSLLERCDKLLNSIAEITGSGQQGESEQPSPVSVLDSSFYKEEEEPSPVMKRCIDYKEQAGDSEDDMWNAALWCTHDTDFVYISEILRACNHFPEDSDVFLLLEKQQGNDTSKPSTLRRRLIFDTVREILHRNRRLPPWKEASWADDTPLLRRIWTEFRRIRGREEEEEVPEELFEVICGVLRKDVAEEGVDEWGERHVEMGDVVLDMERLVFKDLIVETIRELAWSRKPQFNNNRSSVSAYRRKLLF 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181335g00029 718 PANTHER LONGIFOLIA PROTEIN 1 58 IPR033334 GO:0051513
Stsc181335g00029 718 MobiDBLite consensus disorder prediction 443 458 - -
Stsc181335g00029 718 MobiDBLite consensus disorder prediction 67 93 - -
Stsc181335g00029 718 MobiDBLite consensus disorder prediction 359 396 - -
Stsc181335g00029 718 Pfam Domain of unknown function (DUF4378) 549 689 IPR025486 -
Stsc181335g00029 718 MobiDBLite consensus disorder prediction 417 469 - -
Stsc181335g00029 718 MobiDBLite consensus disorder prediction 360 383 - -
Stsc181335g00029 718 MobiDBLite consensus disorder prediction 428 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181335g00029 Stsc-Chr181335 105012 108304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181335g00029 468 718 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 47.638 2.56e-62 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181335g00029 - - adu:107493166 1147.5