Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181335g00004 ATGGAACTGCAATTGAAGAAAAGTGCAGTTTCAAGAAGCTGGATTTTGCTTGAGCAGGATGGCAGCGGAGCCATACTGGATGTGGACAAGTATGCTATCATGCGCATGGTTGATATTCACGCTAGGGACCTTCGAATTCTCGACCCTCTCCTCTCATATCCTTCAACTATTCTTGGCAGGGAGAAAGTCATTGTTCTCAATTTAGAGCACATAAAGGCTATTATCACTGCAGAAAAGGTGTTTGTCAGGGATCCAGCGGATGATGATGTTGTGCCAATTGTTGAAGAACTTCGAAGGCGGTTACCCAAATCAAGTGGGGATGAAGAACCATGTGCTCAAGGAGGTGGACAAGGGGAAGATAACGGTAGCCTTTATCCAATCCAAATATATGAATTAAAGGTTATTATTATGTTTAAATATATAACAATTTATTTTGTTGTAGAATTTCCGTTTGAGTTCCGAGCATTAGAAGTTGCATTGGAAGCAATTTGCAGTTTCCTTGATGCAAGAACAATAGAGTTAGAGACTGCTGCTTATCCTGCTTTGGATGAGCTCACGTCCCAGATTAGCAGTCGTAATTTGGATAGAGTGCGGAAACTGAAGAGTGCAATGACAAGGTTGACAAATCGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTTGACGATGATGACGACATGGCTGATCTTTACTTGTCAAAAAAGTTGGCTAATTTATCTTCTCCTGCAAGTAGTTTCGGTGCTCATCCCAACTGGCTTCTCAGCTCCCCAAATCCAGATTCAAAGATTCATGGATCAAGCAAAGCTAGTACAGCAACCTCACTTCAAGTGGAGAATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCATATTTCACGCAAATCGATGGCACATTGAATAAACTGAACACGTTGCGTGAATATATTGACGACACAGAAGATTACATCAACATACAGCTTGACAGTCACAGAAATCAACTGATTCAGCTGGAGCTGTTCCTTAGCTCGGGGACTGTTTGTCTGTCCATATTTTCATTGGTAGCAGCAATATTTGGTATGAACATTCCATATACATGGAAAGATGGTCACGGATACATGTTTAAATGGGTAAGTACATATCATATCCCTTTCCCTTGA 1140 0.4088 MELQLKKSAVSRSWILLEQDGSGAILDVDKYAIMRMVDIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITAEKVFVRDPADDDVVPIVEELRRRLPKSSGDEEPCAQGGGQGEDNGSLYPIQIYELKVIIMFKYITIYFVVEFPFEFRALEVALEAICSFLDARTIELETAAYPALDELTSQISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDDDMADLYLSKKLANLSSPASSFGAHPNWLLSSPNPDSKIHGSSKASTATSLQVENDVEELEMLLEAYFTQIDGTLNKLNTLREYIDDTEDYINIQLDSHRNQLIQLELFLSSGTVCLSIFSLVAAIFGMNIPYTWKDGHGYMFKWVSTYHIPFP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181335g00004 379 Coils Coil 197 224 - -
Stsc181335g00004 379 CDD Mrs2_Mfm1p-like 14 373 IPR039204 -
Stsc181335g00004 379 Gene3D - 2 85 - -
Stsc181335g00004 379 FunFam Magnesium transporter MRS2-5 141 328 - -
Stsc181335g00004 379 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 371 IPR039204 -
Stsc181335g00004 379 FunFam Magnesium transporter MRS2-1 3 85 - -
Stsc181335g00004 379 Gene3D Magnesium transport protein CorA, transmembrane region 142 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181335g00004 Stsc-Chr181335 11311 13818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181335g00004 3 371 MRS2 Gene Family AT5G64560 69.377 1.03e-153 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181335g00004 K16075 - gmx:100799368 491.5