Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181335g00003 ATGGAACTGCAATTGAAGAAAAGTGCAGTTTCAAGAAGCTGGATTTTGCTTGAGCAGGATGGCAGCGGAGCCATACTGGATGTGGACAAGTATGCTATCATGCGCATGGTTGATATTCACGCTAGGGACCTTCGAATTCTCGACCCTCTCCTCTCATATCCTTCAACTATTCTTGGCAGGGAGAAAGTCATTGTTCTCAATTTAGAGCACATAAAGGCTATTATCACTGCAGAAAAGGTGTTTGTCAGGGATCCAGCGGATGATGATGTTGTGCCAATTGTTGAAGAACTTCGAAGGCGGTTACCCAAATCAAGTGGGGATGAAGAACCATGTGCTCAAGGAGGTGGACAAGGGGAAGATAACGAATTTCCGTTTGAGTTCCGAGCATTAGAAGTTGCATTGGAAGCAATTTGCAGTTTCCTTGATGCAAGAACAATAGAGTTAGAGACTGCTGCTTATCCTGCTTTGGATGAGCTCACGTCCCAGATTAGCAGTCGTAATTTGGATAGAGTGCGGAAACTGAAGAGTGCAATGACAAGGTTGACAAATCGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTTGACGATGATGACGACATGGCTGATCTTTACTTGTCAAAAAAGTTGGCTAATTTATCTTCTCCTGCAAGTAGTTTCGGTGCTCATCCCAACTGGCTTCTCAGCTCCCCAAATCCAGATTCAAAGATTCATGGATCAAGCAAAGCTAGTACAGCAACCTCACTTCAAGTGGAGAATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCATATTTCACGCAAATCGATGGCACATTGAATAAACTGAACACGTTGCGTGAATATATTGACGACACAGAAGATTACATCAACATACAGCTTGACAGTCACAGAAATCAACTGATTCAGCTGGAGCTGTTCCTTAGCTCGGGGACTGTTTGTCTGTCCATATTTTCATTGGTAGCAGCAATATTTGGTATGAACATTCCATATACATGGAAAGATGGTCACGGATACATGTTTAAATGGGTGGTGATGGTTGGGGGAATGGTTTGTGCATCCTTGTTTTTAAGCATAGTAACTTATGCCCGACGCAAAGGCCTTGTGGGGTCTTGA 1119 0.4298 MELQLKKSAVSRSWILLEQDGSGAILDVDKYAIMRMVDIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITAEKVFVRDPADDDVVPIVEELRRRLPKSSGDEEPCAQGGGQGEDNEFPFEFRALEVALEAICSFLDARTIELETAAYPALDELTSQISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDDDMADLYLSKKLANLSSPASSFGAHPNWLLSSPNPDSKIHGSSKASTATSLQVENDVEELEMLLEAYFTQIDGTLNKLNTLREYIDDTEDYINIQLDSHRNQLIQLELFLSSGTVCLSIFSLVAAIFGMNIPYTWKDGHGYMFKWVVMVGGMVCASLFLSIVTYARRKGLVGS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181335g00003 372 Gene3D - 2 85 - -
Stsc181335g00003 372 FunFam Magnesium transporter MRS2-E 92 302 - -
Stsc181335g00003 372 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 308 358 IPR045863 -
Stsc181335g00003 372 Coils Coil 171 198 - -
Stsc181335g00003 372 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 370 IPR039204 -
Stsc181335g00003 372 MobiDBLite consensus disorder prediction 101 120 - -
Stsc181335g00003 372 FunFam Magnesium transporter MRS2-1 3 85 - -
Stsc181335g00003 372 Gene3D Magnesium transport protein CorA, transmembrane region 90 302 - -
Stsc181335g00003 372 CDD Mrs2_Mfm1p-like 14 369 IPR039204 -
Stsc181335g00003 372 Pfam CorA-like Mg2+ transporter protein 258 357 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181335g00003 Stsc-Chr181335 11311 13818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181335g00003 3 345 MRS2 Gene Family AT5G64560 72.521 1.45e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181335g00003 K16075 - gmx:100799368 551.592