Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181335g00002 | ATGGCGAATCGGGTGGTGAAGGTGAAGAGGGAGACGATTGCAGCATGCATGACTTGCCCGCTATGCAACAAGCTCTTCAAAGAAGCCACCACCATATCCGAGTGCCTTCACACCTTTTGCAGGAAGTGCATTTATGATAAAATCACAGATGAGGAATTAGAGTGCTGTCCAATATGCAACATTCATTTGGGTTGTGTTCCACTCGAAAAACTAAGGCCAGACCACAGTTTGCAAGATGTAAGGGCCAAAGTTTTTCCCTTAAAGGGAAGAAAGGTGACAACGACACCTGAACCTGCTGCCCCCTCAGTATCACTACCAGCAAGAAGAAAGGAGAGATCTCTTTCATCTTTGGTGGTCAGCACTCCAAGGGTATCTCAACAAGCAACCATGACAGGAAGAAGAACAAAACCTACAAGAAAGGCTAGTAGTCTGCGATCCTCTAGTTTTTCCATTGAAAAGCCCATTAAAAAAGAGGAAGAAATACTAGAAAATCATCCCGAGAGTTCAAGTTCACGCGACACTTCAAATAAGTTTGCTCAAAATACTGGACAGAGTGAAGGCAGTCAATCCTTACCAAATAATGGAACAGTGAATGGTTCCGAATCATGGGATGCAAAATTGGATCTTTGGAAGCCCTTGAATTGTTTAGTAGAAGTTGCAAGTAGGAGCAAATCTTTCAAGTCTAATGCACAAGGGTCTGATGCTAAACCAGAAACCGTTCAAGTAAATGAGACTAATTCTCAAGTTCTAAAAACCAAAAATAAGGAAAATAAACGCAAGGGGAAAACTGAGGATGAAAAGACTAGCACTTGTCCTGTCTCTTCTGATACAGCAAAACCCAATAAATCGCGTAGAGTTCGCCGTAGAAAGGAACCTCCTTTTGGGGAATCAGGCATATTACCCCAATCTGTGCTGGATTCTAACAGCAGTAAACACTTAAGGACTGGTCCAATTTGGTTCTCCTTAGTAGCTTCTGACAACCAGGAAGGAGACGCACCCTTGCCTCAAATTCCTTCAAGTTATGTGAGAATAAAGGATGGAAGCATACCTGTCTCATTTATTCAAAAATACCTAGTGAAGAAACTAGAGCTGACAAGTGAAGCAGAGGTTGAGATTAAATGTATGGGGCAACCAGTGCTCCCTACACTTCGGCTACAAAATTTGATCGAGTTGTGGCTGGATTCTGCGGCCACATCACAGCGAATTCCAGCAACCATTGGGTCATCAGCAAAGGATTTTGTGATGGTCCTGGGATATGCTAGGAAGGTCCCACACCCTTGA | 1281 | 0.4333 | MANRVVKVKRETIAACMTCPLCNKLFKEATTISECLHTFCRKCIYDKITDEELECCPICNIHLGCVPLEKLRPDHSLQDVRAKVFPLKGRKVTTTPEPAAPSVSLPARRKERSLSSLVVSTPRVSQQATMTGRRTKPTRKASSLRSSSFSIEKPIKKEEEILENHPESSSSRDTSNKFAQNTGQSEGSQSLPNNGTVNGSESWDAKLDLWKPLNCLVEVASRSKSFKSNAQGSDAKPETVQVNETNSQVLKTKNKENKRKGKTEDEKTSTCPVSSDTAKPNKSRRVRRRKEPPFGESGILPQSVLDSNSSKHLRTGPIWFSLVASDNQEGDAPLPQIPSSYVRIKDGSIPVSFIQKYLVKKLELTSEAEVEIKCMGQPVLPTLRLQNLIELWLDSAATSQRIPATIGSSAKDFVMVLGYARKVPHP | 426 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181335g00002 | 426 | MobiDBLite | consensus disorder prediction | 114 | 150 | - | - | |
Stsc181335g00002 | 426 | SUPERFAMILY | RING/U-box | 14 | 83 | - | - | |
Stsc181335g00002 | 426 | ProSiteProfiles | Zinc finger RING-type profile. | 19 | 60 | IPR001841 | - | |
Stsc181335g00002 | 426 | ProSitePatterns | Zinc finger RING-type signature. | 35 | 44 | IPR017907 | - | |
Stsc181335g00002 | 426 | MobiDBLite | consensus disorder prediction | 91 | 199 | - | - | |
Stsc181335g00002 | 426 | Pfam | Zinc finger, C3HC4 type (RING finger) | 19 | 59 | - | - | |
Stsc181335g00002 | 426 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 1 | 422 | IPR044807 | GO:0004842 | |
Stsc181335g00002 | 426 | MobiDBLite | consensus disorder prediction | 251 | 269 | - | - | |
Stsc181335g00002 | 426 | MobiDBLite | consensus disorder prediction | 168 | 199 | - | - | |
Stsc181335g00002 | 426 | CDD | RING-HC_PCGF | 17 | 60 | - | - | |
Stsc181335g00002 | 426 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 113 | IPR013083 | - | |
Stsc181335g00002 | 426 | MobiDBLite | consensus disorder prediction | 225 | 250 | - | - | |
Stsc181335g00002 | 426 | MobiDBLite | consensus disorder prediction | 151 | 167 | - | - | |
Stsc181335g00002 | 426 | SMART | ring_2 | 19 | 59 | IPR001841 | - | |
Stsc181335g00002 | 426 | MobiDBLite | consensus disorder prediction | 225 | 309 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181335g00002 | Stsc-Chr181335 | 4964 | 9828 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181335g00002 | 2 | 345 | C3H Transcription Factor Family | AT2G30580 | 53.143 | 1.50e-107 | 319 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181335g00002 | K16277 | - | gmx:100793731 | 657.521 |