Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181334g00022 ATGGATGCTCCAGACTTGTCCAAAGCCTTACATCTTAAAGAATTAGATCTTTCCTCATGTAAGAATTTGATATCAGTGCATCCATCAGTTTTCTCTCTCCCAAAGCTTGTTGAACTGGACATGAGCCTTTGTGATAGGCTCGAGAGACTTCCAGCTTTTCACCCATCTGTTTTCTCCCTCCCAAAGCTTGTTAGTCTGGACATGCGCGACTGTAAAAGGCTCGAGAGTTTTTCAGATATAGGAATGCTGGATATAGATATAGGAATACTGGATAAAGAAGCATCTCGATCTGCATCTGCATTGTCCTCATCATCCAATCTTAAAAAATTGAATCTGAGAGGATGTGTGAATCTGAAGCATCTTCCAGACACCTTTTATAAGCTCACATCTCTTCAAGAGCTTCAGCTTCACGGGTGCAAAGAGTTGGACACATCAAACATACACATCTTATTTGATGGTTCATCTTCTTTGACATACCTAGATATGGATGGGTGTGATAAGTTGTATGAACTTCCAGATAACATAACCAACTTATCATTGTTAGAGTGGTTATCACTTGAAGAAACTAACGTGAAGAGCATGCCAGAAAGCATCAAACATCTTCCACACCTGAAACACCTCACTTTAAGGAATTGCAAAAAACTCGAATCAGTACCTCAGATTCCACCATCCCTCCATATGTTATTCTTGGATGATTGCATAATGTTGGAGAGAGTGTTCACTCCAACGCCTCAGCTACTCCAACACCACCTTGCATCTTTTCAAAGTTCTAATCAAGGAAGTGTCCCTCATATTGCTTATTTGCATGGTAACCATGTATACTGTACATTGGATAATTGCCCAAACTTAGAGAGGGATGCCATTGATGATATTTTGAAATATTTTGATTGCTGCGACGAGGGAATGACAAGATTGTAA 918 0.3987 MDAPDLSKALHLKELDLSSCKNLISVHPSVFSLPKLVELDMSLCDRLERLPAFHPSVFSLPKLVSLDMRDCKRLESFSDIGMLDIDIGILDKEASRSASALSSSSNLKKLNLRGCVNLKHLPDTFYKLTSLQELQLHGCKELDTSNIHILFDGSSSLTYLDMDGCDKLYELPDNITNLSLLEWLSLEETNVKSMPESIKHLPHLKHLTLRNCKKLESVPQIPPSLHMLFLDDCIMLERVFTPTPQLLQHHLASFQSSNQGSVPHIAYLHGNHVYCTLDNCPNLERDAIDDILKYFDCCDEGMTRL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181334g00022 305 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 151 285 - -
Stsc181334g00022 305 Gene3D Ribonuclease Inhibitor 1 85 IPR032675 -
Stsc181334g00022 305 Pfam Leucine Rich repeat 10 21 IPR001611 GO:0005515
Stsc181334g00022 305 Gene3D Ribonuclease Inhibitor 99 294 IPR032675 -
Stsc181334g00022 305 SUPERFAMILY RNI-like 4 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181334g00022 Stsc-Chr181334 119488 120752 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181334g00022 4 222 WRKY Transcription Factor Family AT4G12020 27.854 3.77e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181334g00022 - - aip:107627842 259.61