Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181334g00016 ATGGAAGAAGATAAGTTGCAGCGGCAATGGTCCCTCAAAGATTTCGAGATCGGAAAACCTCTTGGTAGAGGAAAATTCGGCAGAGTCTACGTCGCCAGAGAAGTCAAGTACATTTTGAGTCTAACAAGGGCATTGGCATATTGTCATGAGAAACATGTTATACATAGGGATATCAAGCCAGAAAATTTGTTGCTTGACCATGAGGGTCGCCTTAAAATTGCAGACTTCGGTTGGTCTGTACAATCTAGAAGCAAGAGACATACTATGTGTGGTACATTGGACTACTTAGCTCCAGAAATGGTAGAAAACAAAGCTCATGATTATGCAGTCGATAACTGGACTCTGGGTATCCTTTGTTATGAGTTCCTCTATGGCGTTCCTCCATTTGAGGCAGAGAGTCAAGCTGATACCTTCAAAAGGATCATGAAGGTTGACCTATCCTTCCCTGCTACGCCATTTGTTTCCTTAGAAGCAAAAGATCTGATTAGTCGGCTCTTGGTGAAAGACTCCTCAAGAAGGCTCTCGCTTCAGAAGATAATGGAGCATCCATGGATAATGAAGAATGCAAATCCCATGGGTAGCTGCAAATAG 591 0.4298 MEEDKLQRQWSLKDFEIGKPLGRGKFGRVYVAREVKYILSLTRALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGVPPFEAESQADTFKRIMKVDLSFPATPFVSLEAKDLISRLLVKDSSRRLSLQKIMEHPWIMKNANPMGSCK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181334g00016 196 SMART serkin_6 15 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181334g00016 196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
Stsc181334g00016 196 Pfam Protein kinase domain 36 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181334g00016 196 SUPERFAMILY Protein kinase-like (PK-like) 8 189 IPR011009 -
Stsc181334g00016 196 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 5 36 IPR030616 GO:0004672
Stsc181334g00016 196 Gene3D Transferase(Phosphotransferase) domain 1 39 195 - -
Stsc181334g00016 196 Gene3D Phosphorylase Kinase; domain 1 2 38 - -
Stsc181334g00016 196 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181334g00016 Stsc-Chr181334 95411 98552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181334g00016 27 191 CBL-interacting serine-threonine protein kinases AT5G10930 42.690 1.02e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Stsc181334g00016 Pkinase 9.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181334g00016 K08850 - gmx:106794372 311.612