Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181334g00014 ATGATATTAAAGGGAAAATCCTTAGGTAACTCAAACTATGCACCATGTAAAGGCACAGTGTTTAGCCAGCTCCTCCACTTCAAGAACCTCCATGACTACCATACCGAACTGGCCAAGACTAATCCGACTATCCGGCTACTCGCGCCGGGTCAGAGCGAATTGTACACCGTCGACCCGAGAAATGTTGAGCACATATTGAAAACAAAGTTTGATAAGTACTCAAAAGGGAAATACAATCAAGATATTTTGAGTGATCTTTTTGGTGAAGGGATTTTTAATGTTGATGGTGAGAAGTGGAGGCAACAGAGGAAGCTTGCTAGCTATGAATTTTCCACTAGAGTTCTTAGGGACTTTAGTTGCTCTGTTTTTAGAAAGAATGCTGCTAAGTTGGTTAGAGTTTTATCAGAATTTTCTAATCAGGGTGTGGCTTTTGATTTGCAAGATTTATTAATGAGATCTGCTTTGGACTCAATTTGCCAAGTTGGGTTTGGAACAGAATTGAACTGCTTAGAAGAATCAAGCAAAGAAGGTGTTGAGTTCATGAAAGCCTTTGATGAATCAAATGCATTGATTTATTGGCGTTATGTTGATCCATTTTGGAAGATCAAGAGGTTCCTCAACGTTGGTAGTGAAGCTACCCTTAAGAAAAATGTTAAGTTAATGGATGATTTTGTCCATGGAGTCATTAAGGCCAGAAAAGCACAATTAGCAGTTCAACAAGAAGAGTCTTCTAATAATGTTAAAGAGGACATACTGTCAAGGTTTTTGATGGAGAGCAAGAAGGAGCCAGAAACTATGACAGAAAAGTATTTGAGGGATATAATAATGAACTTTATGTTAGCTGGAAAAGACTCAAGTGCAAACACTCTCACATGGTTCTTCTACCTGCTCTGCAAGAACCCTCTTATTCAGGAAAAGATTGCACAAGAAATCAGAGATAATGTCACTTGTTATTGTAGCAGCAGCCATGAAGGAGAAGAAGATAATCAAGAACCACAAAACATTGATGAGTTTGTGTCCAATTTAACAGATGATGCCATTGATAAAATGCATTATCTTCATGCTGCATTGACAGAGACCTTGAGACTCTACCCTGCTGTCCCTCTGGATGGGAGAACAGCAGAAGAAGAAGACACTCTTCCAGATGGATACAAAGTGAAGAAGGGAGATGGAGTTTACTATTTAACATATGCCATGGCAAGAATCACTTCTATTTGGGGTGAAGATTCTGAGGAATTCAAGCCTGAAAGATGGCTCAATCATCATGGACTTTTTCAACCTCAATCTCCATTCAAATTTGTAGCTTTCCATGGTGGACCACGTATATGCTTAGGGAAGGAATTTTCTTACAGACAGATGAAAATAGTGACAATGGCTCTTCTATTCTTCTTCAGGTTTAAACTGGCAAATGAAGCACAGAGTGTTACTTATAGGGTTATGTTTACTCTTCAAATGGATAAGGGTCTCCCTCTCTATGCACTTCCAAGGTCATTAAAGTAA 1500 0.3893 MILKGKSLGNSNYAPCKGTVFSQLLHFKNLHDYHTELAKTNPTIRLLAPGQSELYTVDPRNVEHILKTKFDKYSKGKYNQDILSDLFGEGIFNVDGEKWRQQRKLASYEFSTRVLRDFSCSVFRKNAAKLVRVLSEFSNQGVAFDLQDLLMRSALDSICQVGFGTELNCLEESSKEGVEFMKAFDESNALIYWRYVDPFWKIKRFLNVGSEATLKKNVKLMDDFVHGVIKARKAQLAVQQEESSNNVKEDILSRFLMESKKEPETMTEKYLRDIIMNFMLAGKDSSANTLTWFFYLLCKNPLIQEKIAQEIRDNVTCYCSSSHEGEEDNQEPQNIDEFVSNLTDDAIDKMHYLHAALTETLRLYPAVPLDGRTAEEEDTLPDGYKVKKGDGVYYLTYAMARITSIWGEDSEEFKPERWLNHHGLFQPQSPFKFVAFHGGPRICLGKEFSYRQMKIVTMALLFFFRFKLANEAQSVTYRVMFTLQMDKGLPLYALPRSLK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181334g00014 499 CDD CYP86A 42 489 - -
Stsc181334g00014 499 Gene3D Cytochrome P450 15 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 Pfam Cytochrome P450 23 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Stsc181334g00014 499 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 SUPERFAMILY Cytochrome P450 24 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00014 499 PANTHER CYTOCHROME P450 8 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181334g00014 Stsc-Chr181334 80662 84476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181334g00014 2 497 Cytochrome P450 AT2G45510 60.484 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181334g00014 - - gmx:100792128 781.171