Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181334g00013 ATGGGAATTTTCTTTGCTTTGTTCTCATTGCTATCTTTTCTCTTCCTATGTATCTTCATCCTCTTCATTTTCCTCACACTATCCACATTCATAGGACAATCAATTTCTGACCCAAAATACCCTCCAGTCAAAGGAACAGTCTTCAACCAACTCTTCCACTTCAAAACCCTTTATGACTACCAAAAAAACATTGCAATAGCAAACCCTACTTTTAGGCTTCTTGCCCCAAGAAAATCCAAGATTTTCACATCTGACCCGAGGAATGTGGAGCACATACTCAAGAACAAGTTTGAGAATTACTCAAAAGGAGAGCGAAACCATGGAATCTTGGTTGATCTTTTTGGTGATGGGATCTTCAATGTTGATGGTGAGAAGTGGAGGCATCAAAGGAAGCTTGCAAGCTTTGAGTTCTCTACTAGGGTTCTTAGGGACTTCAGTTGTAACGTTTTTAGAAGAAATGCTGCCAAGTTGGTTAGGGTTATTTCCGGGTTTTCAAGTGATGGTATGATCTTTGATATGCAGAATGTTCTAATGAAATGCACGTTGGACAATATATTCAAAGTTGGGTTTGGAGTGGAATTGAATTGTTTAGAAGGATCAAGCAAAGAGGCAAATGCGTTCATGAAGGCCTTCGATGATTCAAATGCTTTTGTGTATAGACGCTTTGTGAATCCATTTTGGAAGCTCAAAAGGTTTCTTAACATTGGAACAGAAGCTGCTCTCAAGAACAATGTCAAAATCATTGATGATTTTGTTCACACTTTAATCAAGGCCAAAAGAGAATTGTTCTCCATCAAGAACAATGATCCCAGTGAGAAGGAGGATATGCTTTCAAGATTCATGGCAGAGAGTGAGAAGGACCCTGCTTATGATGATGACAATATGAGTAATGAGTATTTGAGGGACATAATTCTGAACTTTATGATTGCTGGGAAAGATTCAAGTGCTAATACTTTGTCATGGTTCTTCTATATGATGTGCAAGAATCCTCATATTCAAGAAAAGATTGCACAGGAAGTCATGGATAATGTTACTTGCAACAACAACAACATAGATGAATTTGTGAATAACATAAGTGATTCTACACTTGAGAGAATGCATTATCTTCATGCAGCACTCACAGAAACTTTGAGGCTTTATCCTGCACTACCTGTGAATGGGAGAACAGCAGAAGAAAGTGACATACTTCCAGATGGGTATAGATTGAAGAAAGGAGAATCAATTTACTATTTGGCATATGCTATGGGAAGGATGCCTTACATTTGGGGACATGATGCTGAAGAATTCAAGCCTCAAAGATGGCTCAATCAACATGGAGTTTTTGAACCTCAATCTTCCTTCAAATTCATAGCTTTTCATGGTGGTCCTCGGATATGCCTAGGAAAAGACTTTGCTTACAGACAGATGAAGATAATAGCAATGGCTCTTCTTCGATTCTTTAGGTTTAAGATGGCAAGTGAAACGAATAACGTGACATATAGAGTGATGTTCACAATTCATATTGATCATGGCCTCCCTCTTTCTGCAATTCAAAGATAG 1539 0.3827 MGIFFALFSLLSFLFLCIFILFIFLTLSTFIGQSISDPKYPPVKGTVFNQLFHFKTLYDYQKNIAIANPTFRLLAPRKSKIFTSDPRNVEHILKNKFENYSKGERNHGILVDLFGDGIFNVDGEKWRHQRKLASFEFSTRVLRDFSCNVFRRNAAKLVRVISGFSSDGMIFDMQNVLMKCTLDNIFKVGFGVELNCLEGSSKEANAFMKAFDDSNAFVYRRFVNPFWKLKRFLNIGTEAALKNNVKIIDDFVHTLIKAKRELFSIKNNDPSEKEDMLSRFMAESEKDPAYDDDNMSNEYLRDIILNFMIAGKDSSANTLSWFFYMMCKNPHIQEKIAQEVMDNVTCNNNNIDEFVNNISDSTLERMHYLHAALTETLRLYPALPVNGRTAEESDILPDGYRLKKGESIYYLAYAMGRMPYIWGHDAEEFKPQRWLNQHGVFEPQSSFKFIAFHGGPRICLGKDFAYRQMKIIAMALLRFFRFKMASETNNVTYRVMFTIHIDHGLPLSAIQR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181334g00013 512 SUPERFAMILY Cytochrome P450 38 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 Pfam Cytochrome P450 56 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 CDD CYP86A 69 505 - -
Stsc181334g00013 512 Gene3D Cytochrome P450 33 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Stsc181334g00013 512 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00013 512 PANTHER CYTOCHROME P450 24 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181334g00013 Stsc-Chr181334 74280 78445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181334g00013 13 512 Cytochrome P450 AT2G45510 59.363 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181334g00013 - - zju:107423707 710.294