Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181334g00012 ATGGATTTTCTTCACAACCCTTATGTCTTTGCATCTCTTTCTGCAGGTTTAGTTCTTCTGTTGGCACAATTTCTGTTCAGAAAAGTAAACAAAAGGGGTAGAAAGAAGAAGAAGTACCATCCAATTGGTGGCACAGTGTTCAACCAATTGATGAACTTCAATAGGCTGCACCATTACATGACTGATCTTGCAGGGAAGTATAAGACTTACAGATTGCTGAGTCCATTCAGGAATGAGGTTTACACTTCTGATCCTATCAATGTTGAGTATATCCTCAAAACCCATTTTGAAAATTATGGAAAGGGAATGTACAACTACCAAAATTTAAGGGATTTCCTGGGTGATGGAATCTTCACCGTCGATGGCGAGAAATGGCGTGAACAGAGGAAGATATCAAGCCATGAATTCTCCACCAAGATGTTAAGAGATTTCAGCATTTTTGTATTCAGAAAGAATGCAGCAAAAGTTGCTAATGTAGTGTCTGAAGCTACAACTTCTAACAAGACATTGGAAATCCAAGACCTTTTGATGAAATCAACTTTGGATTCAATATTCCAAGTTGCATTTGGAACTGAACTTGACAGCATGTGTGGATCAAGCGAAGAAGGGAAGAACTTCGCTGAGGCTTTTGAAATTGCAAGTATGCTTACTCTTTACCGGTATGTCGATGTCTTCTGGAAGATAAAGAAATTTCTGAATGTTGGATCAGAGGCAGTCTTAAGAAAGAACACCAAAATCTTAAATGACTTTGTCTTTAAGCTAATTAACACAAGAATTCAGCAATTGCAGATTTCAAAGGATGATTCTACTTATCCTGAAGTGCAAGAAAAAGCTGCAGAAGAAGTGAAAGAAGCAACAAACACAAAAACAAAGACATTTAGCAGTGGTGCTGAGTTTGTGTCTTTTGTAACTGATGAAGCTCTTGAAAAGATGCATTATCTCCATGCTGCAATTACCGAAACTCTCAGACTTTACCCTGCAGTTCCAGTGGATGCGAAGATTTGCTTTGGTGATGATACATTACCGGATGGATACAATGTGAATAAAGGAGATATGGTATCTTATCAACCTTATGCAATGGGGAGGATGAAATTCATATGGGGTGATGATGCTGAAGAATTTAGACCAGAAAGATGGCTTGATCACAATGGCATTTTTCAGCCAGAGAGTCCTTTCAAATTTACAGCTTTCCAGGCAGGTCCTCGGATTTGTCTTGGAAAGGAGTTTGCATACAGACAGATGAAGATATTCTCAGCAGTTTTGTTAGGTTGTTTCCGGTTTGAATTGAATGATGAAAAGAAAGTTGTCACTTACAAGACAATGATAAATCTTCACATTGATGGAGGTCTTGAAGTTAAAGCCTTCCACAGGCACTGGGTTAATTAG 1386 0.3846 MDFLHNPYVFASLSAGLVLLLAQFLFRKVNKRGRKKKKYHPIGGTVFNQLMNFNRLHHYMTDLAGKYKTYRLLSPFRNEVYTSDPINVEYILKTHFENYGKGMYNYQNLRDFLGDGIFTVDGEKWREQRKISSHEFSTKMLRDFSIFVFRKNAAKVANVVSEATTSNKTLEIQDLLMKSTLDSIFQVAFGTELDSMCGSSEEGKNFAEAFEIASMLTLYRYVDVFWKIKKFLNVGSEAVLRKNTKILNDFVFKLINTRIQQLQISKDDSTYPEVQEKAAEEVKEATNTKTKTFSSGAEFVSFVTDEALEKMHYLHAAITETLRLYPAVPVDAKICFGDDTLPDGYNVNKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWLDHNGIFQPESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFELNDEKKVVTYKTMINLHIDGGLEVKAFHRHWVN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181334g00012 461 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 PRINTS P450 superfamily signature 270 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 PANTHER CYTOCHROME P450 26 262 - -
Stsc181334g00012 461 SUPERFAMILY Cytochrome P450 38 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 Gene3D Cytochrome P450 22 269 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 CDD CYP86A 68 450 - -
Stsc181334g00012 461 Gene3D Cytochrome P450 270 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 PRINTS E-class P450 group IV signature 404 422 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 PRINTS E-class P450 group IV signature 345 359 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 PRINTS E-class P450 group IV signature 311 327 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 Pfam Cytochrome P450 270 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00012 461 Pfam Cytochrome P450 41 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181334g00012 Stsc-Chr181334 67902 71443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181334g00012 1 457 Cytochrome P450 AT2G45510 45.686 1.21e-155 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181334g00012 - - gmx:100789049 710.679