Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181334g00008 ATGGATTACTACCTTACACTAATACTTCTCATCTTATCCTTTCTTGTCTCAACACTTCTTTTCTCCTTCATCATCATCCAAAAACAACATTCAAAGCTTCTTCCACCAGGTCCTAAACCATATCCCATCATTGGAAACCTCTTACATCTTCTTCTTAACAACAAAAACAATTATAATTCTCTTCAAACATTCATCAACCTCTCCAAAACTTATGGACCTATAATTACCCTCAAATTAGGCACTCTTACCTCCATAGTGATTTCTTCTCCACAAATAGCCAAAGAAGCACTCCAAAAAAATGATGTGGCCTTATCCAATAGAACAATCCCATACACCATTTTTTCAACACTTGAGGAACATTGCAAGAAATCAATTATCTTCTTACCTTCATCAACCAAATGGAGATCCTTCAGAAGGGCTTGCGCAACAAGAATATTCTCGCCTCAACGGCTCGACTCCATGCAAATCCTAAGGAAGAGAAAGGCTCAAGACTTGTTAGATTTTTTGCATGAATGTTGCAAAAAAGGTGAAGCTTTAGATATTGGTGAGGCTATTTTTAAAACCGTGCTAAATACAATATCAAACACTTTTATTTCCATGGATTTGGTTGATTACTATGATAATGAGAAGTTTAAGGTGTTTAAGGATATAGTGTTTGGCTTCACTGAGGAATCTACAAGGCCTTGTTTGGGAGATTTTTTTCCTTTGTTAGGATTCTTGGATTCACGTGCTGCACGTGCAAGGACAAAAGATCGATATGCAAAGTTGTATGCAGTTATTGATGGTGCCATGGAAGAAAGAATTCGTTTGAGGGATTCAAAACCTGGTTGTTATTCTCAAGAGTTCAATGATGCATTGGATTCCCTTTTGGATCTTGTTGATGAAGAGAGTTCTGAATTCAATCGCCATGATGTTGTCCCTTTATTGATGGATTTATTTGTTGCTTCAATAGACACAACATCAAGCACATTAGAATGGGCGATGGCAGAGTTGATGCATAATCCAACAAAATTGCACAAAGTTAGAGAGGAGCTTCATCAATTACTTGGCCAAAATGAAGAAGTTGAAGAGTCTCATATAACAAAGCTCCCATACATTAATGCAATTGTGAAAGAAACTTTGAGGCTTCATCCACCAACACCATTGCTAGTACCCCACAAAGCAAATGGTGATGTAGAGTTAGGTGGCTTTACTGTGCCCAAAAATGCACAAATCCTAATTAATGTGTGGTCTATTGGAAGAGACTCACACATTTGGGCTAACCCTAATTCATTTGAACCGGAGAGGTTCTTGGATAGTGAAATTGATTTTAAGGGCAAAAATTTTGAGTTGATTCCATTTGGTTCTGGAAGAAGAATTTGCCCTGGATTACCATTGGCTTCAAGGAGTTTGAGTTTCATGTTGGCATCACTTTTGTATCATTTCAATTGGAAGATTGCTAATGAGATGAAACCAGAAGATATAAATATGAGTTTTAGTTTTGGAATTACCTTACATAAGGCCCAACCTTTACTTCTTGTACCTATCAAAATTTAG 1536 0.3698 MDYYLTLILLILSFLVSTLLFSFIIIQKQHSKLLPPGPKPYPIIGNLLHLLLNNKNNYNSLQTFINLSKTYGPIITLKLGTLTSIVISSPQIAKEALQKNDVALSNRTIPYTIFSTLEEHCKKSIIFLPSSTKWRSFRRACATRIFSPQRLDSMQILRKRKAQDLLDFLHECCKKGEALDIGEAIFKTVLNTISNTFISMDLVDYYDNEKFKVFKDIVFGFTEESTRPCLGDFFPLLGFLDSRAARARTKDRYAKLYAVIDGAMEERIRLRDSKPGCYSQEFNDALDSLLDLVDEESSEFNRHDVVPLLMDLFVASIDTTSSTLEWAMAELMHNPTKLHKVREELHQLLGQNEEVEESHITKLPYINAIVKETLRLHPPTPLLVPHKANGDVELGGFTVPKNAQILINVWSIGRDSHIWANPNSFEPERFLDSEIDFKGKNFELIPFGSGRRICPGLPLASRSLSFMLASLLYHFNWKIANEMKPEDINMSFSFGITLHKAQPLLLVPIKI 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181334g00008 511 Coils Coil 338 358 - -
Stsc181334g00008 511 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 510 - -
Stsc181334g00008 511 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 FunFam Cytochrome P450 76C4 26 507 - -
Stsc181334g00008 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Stsc181334g00008 511 Gene3D Cytochrome P450 23 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 CDD CYP76-like 68 508 - -
Stsc181334g00008 511 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00008 511 Pfam Cytochrome P450 35 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181334g00008 Stsc-Chr181334 35183 38342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181334g00008 8 510 Cytochrome P450 AT2G45550 45.776 4.90e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181334g00008 - - gmx:100809483 539.65