Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181334g00005 ATGGCAGAACTACTCCATAACCCTAATAACATAGTAAAAGTTAGAGAAGAACTTGGACAAGTCCTTGGTAATGGTGAACAAAAACTTGAAGAATCACATATTTCAAAGCTTCCTTTTCTAAGAGCAATTGTTAAGGAAACCCTACGTTTGCATCCACCAGCCCCATTTTTAGTTCCTCGCCGGGCAGAAAATGATGTTGAAGTATGTGGCTACTTGGTTCCAAAAAATGCTCAAATCCTAACAAATGTATGGGCTATGGGGAGAGATTCAAGTGTTTGGAAAATCCCTAATGAGTTCATGCCTGAAAGATTCTTGGAAAGTGAAATTGATTTTAAGGGACAAGATTTTGAGCTAATTCCGTTTGGTGCCGGAAGAAGAATTTGTGCTGGATTATCATTAGGGTTTAGGAGTATACACTTTGTGTTAGCTTCTCTTTTATTTGAATATGATTGGAAGCTTCCAAATAAGGTGAATCCAGAAGATATGGATATGTCTGAGAAATATGGAATTACTTTACATAAGGCACATCCTCTTCAAGTTATTCCTATTTCCATGCATAACAATATCAAGTGA 573 0.3682 MAELLHNPNNIVKVREELGQVLGNGEQKLEESHISKLPFLRAIVKETLRLHPPAPFLVPRRAENDVEVCGYLVPKNAQILTNVWAMGRDSSVWKIPNEFMPERFLESEIDFKGQDFELIPFGAGRRICAGLSLGFRSIHFVLASLLFEYDWKLPNKVNPEDMDMSEKYGITLHKAHPLQVIPISMHNNIK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181334g00005 190 PRINTS E-class P450 group I signature 82 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 PRINTS E-class P450 group I signature 128 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 PRINTS E-class P450 group I signature 118 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 PRINTS E-class P450 group I signature 41 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 184 - -
Stsc181334g00005 190 FunFam Os10g0167200 protein 1 181 - -
Stsc181334g00005 190 SUPERFAMILY Cytochrome P450 1 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 PRINTS P450 superfamily signature 128 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 PRINTS P450 superfamily signature 119 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 PRINTS P450 superfamily signature 42 53 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 Gene3D Cytochrome P450 1 185 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00005 190 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 121 130 IPR017972 GO:0005506|GO:0016705
Stsc181334g00005 190 Pfam Cytochrome P450 2 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181334g00005 Stsc-Chr181334 18148 18765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181334g00005 1 183 Cytochrome P450 AT2G45550 57.923 2.21e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181334g00005 - K26037 gmx:100779789 270.396