Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181334g00004 ATGCAACCAACGTCTCGATGGAGAACACTTAGGAAAGTTTGCGCTACCAAAGTGTTCTCTTCGCAACAACTTGATTCTACTCAGGTTGTTCGTCGAAGAAAAGTCAAAGAATTGATGGATTTCGTGAAGAAAACAAGTGAGACATTTGATGTTTTGGATATTAGTGAAGCTATTTTCACAACCGTGCTAAATTCGATATCAAACACTTTGTTTTCTATGGATGTGGTCCAACTTGGTTGTTCTTCTAAGTCTCAAGAATTCAAGGACATCTTTTGTGGCATCACTGAAGAAGCTGGAAAACCTAATGTTGTGGATTACTTTCCAATCTTTGCCAAAATTGATCCACAAGGTGCACGTGCTAGAATGACCAAATATTACAAGAAGATGATTGATTTTTTGGATGGTATTGTAGAAGAAAGATTGAGACTAATTAAGGGTCTACAAATGGGGGATACTACCAAGGAATACAAAGATGTGTTAGATTATGTGTTAGAAGTGATGTTGGAGGATAATTCTCAAGTCACTCGTATCCATGTCTTGCATTTACTTGTGGATTTATTTGTGGCTGGAATAGACACAACAGCAAGTACTATAGAATGGGCAATGACAGAGTTACTATACAACCCAAAAAAGCTACAAAAATTGAAAAATGAACTCCAAGATGTTATTGGCAAAGAAGAAAAACAAATTGAAGAATCACACATCTCAAAGCTTCCTTTTCTAAGAGCAGTGGTGAAAGAAACGTTTCGGTTACATCCACCATTTCCACTAATACCACACAAGTCCAAAGAGGATGTTGAATTATGTGGCTTCAATGTGCCTAAAAATGCACAAGTTTTGATTAACATTTGGGGTGTAGGGAGAGATCCAAGTATTTGGAGAAACCCTAATGAATTTGTGCCTGAAAGGTTCTTGGAAAGTAAGATTGATTATCAAGGAAATGATTGTGAGTTGATTCCATTTAGTGCTGGAAGAAGAATGTGTCCAGGGTTGCCATTGGCTTATAGAGGTGTGCACACTGTGTTGGGTTCTCTTCTACATTGCTATGATTGGAAGCTTGTGAATAATGGAGAAAAGGAAAAGGGTTTGGATATGTTTGATGAAAAATTTGGACTTAGCTTGCATAAGGCTAAGCCTCTTCAGGCTATTCCCATATACAATAATCACAATAATTAA 1176 0.3716 MQPTSRWRTLRKVCATKVFSSQQLDSTQVVRRRKVKELMDFVKKTSETFDVLDISEAIFTTVLNSISNTLFSMDVVQLGCSSKSQEFKDIFCGITEEAGKPNVVDYFPIFAKIDPQGARARMTKYYKKMIDFLDGIVEERLRLIKGLQMGDTTKEYKDVLDYVLEVMLEDNSQVTRIHVLHLLVDLFVAGIDTTASTIEWAMTELLYNPKKLQKLKNELQDVIGKEEKQIEESHISKLPFLRAVVKETFRLHPPFPLIPHKSKEDVELCGFNVPKNAQVLINIWGVGRDPSIWRNPNEFVPERFLESKIDYQGNDCELIPFSAGRRMCPGLPLAYRGVHTVLGSLLHCYDWKLVNNGEKEKGLDMFDEKFGLSLHKAKPLQAIPIYNNHNN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181334g00004 391 PRINTS E-class P450 group I signature 242 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 PRINTS E-class P450 group I signature 198 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 PRINTS E-class P450 group I signature 178 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 PRINTS E-class P450 group I signature 328 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 PRINTS E-class P450 group I signature 282 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 PRINTS E-class P450 group I signature 318 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 CDD CYP76-like 2 384 - -
Stsc181334g00004 391 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 321 330 IPR017972 GO:0005506|GO:0016705
Stsc181334g00004 391 Gene3D Cytochrome P450 1 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 Coils Coil 212 232 - -
Stsc181334g00004 391 SUPERFAMILY Cytochrome P450 5 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 FunFam Geraniol 8-hydroxylase 124 383 - -
Stsc181334g00004 391 Pfam Cytochrome P450 5 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 385 - -
Stsc181334g00004 391 PRINTS P450 superfamily signature 243 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 PRINTS P450 superfamily signature 189 206 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00004 391 PRINTS P450 superfamily signature 319 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181334g00004 Stsc-Chr181334 13487 15586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181334g00004 4 385 Cytochrome P450 AT2G45550 46.494 7.41e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181334g00004 - - aip:107626003 509.99