Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181334g00003 ATGGAGTTTTCAGTACTTCTTTTAATTTCATTTTTTGTGTTTGCAATTGTTCATCTTCTAATCTCCAATTTAGTAATCAAAACACAAAAATCTTCCACCAAACTTCCACCGGGTCCAAAACCTTTACCAATCATAGGAAACATCTTAGAACTTGGTACCCAACCTCACCAATCACTCACTAAGCTTTCACAAACTTATGGACAAATAATGACTCTTAAGCTTGGTAACATAACTACCATAGTTATTTCCTCTCCAAACTTAGCAAAAGAAGTGCTACATAAAAATGACTTAATTTCTACTTATAGAACAGTCCCGGATACTCTTCGTGCACTTGATCACAACATATATTCGGTGGGATGGATGCAACCTTCAAACGAATGGAGGATTCTTCGAAAAATATGTGCTACCAAAGTGTTCTCTTCGCAACAACTTGATTCCACACAAGTTCTTAGACAAAGGAAAGTGCAAGAAATGATCGATTTTATTAAGAAAAGAAGTGAAAAAGGCAAAGCAATAGATGTCGGCGAAATTGCTTTTATAACCGTGCTTAATTTTGTATCAAACACCTTCTTTTCTATGGATTTAGGTGATTACAATTCTTCCAAGTCTCAAGAGTGGAAGAAGAACTTTTGTTGTATCACTGAAGAAGCTGGAAAGCCTAATGTTGTGGACTTCTTCCCAATCTTTCGCATGCTTGATCCACAAGGTGCACGTGCGAGAATGACCAAGTATTTTAGAGAGTTGATAGATTTCTTTGATGGTCTTGTTGAAGAAAGATTGAAATTAAGGTCTCCAGAAATGGAAACTAATCAAGCATGCAAAGATGTTCTAGATTCTGTGTTACAAGTTATGTTGGAAGAGAATTCTCAAGTGAGCCGACTCCATGTGTTGCATCTATTTTTGGTTTTATTAGTGGCCGGAGTAGAAACAACATCAATCACCATAGAATGGGCAATGGCAGAACTACTAAAAAGCCCCAAAAACCTTGAAAAGATTAAAAATGAACTTCAACATGTTCTTGGCAAAGATGAACAACTTGAAGAAAAACACATTTCAAAACTTCCATTTCTAAAATCAGTTGTAAAAGAAACGTTTCGCTTGCACCCACCAGCCCCATTATTAGTACCTCACAAATCACAAGAAGATGTTGAACTATGTGGCTTCAATGTGCCTAAAAATGCACAAATTTGGGTCAACGTATGGGCTATGGGAAGAGATTCAAGCATTTGGACAAACCCTAATGAGTTCATGCCTGAAAGATTCTTAGAAAGTGAGATTGATTTTCAAGGACATGATTTTGAGCTAATTCCATTTGGGGCTGGAAAAAGAATGTGTCCTGGATTGCCAATGGCTTATAGGGGTGTGCACATTTTGTTGGGATCACTTGTTCATTGCTTTGATTGGAAGCTAGCAAATGAAGTAAAGGAAGAGGATTTGGATATGTCTGAGAATTTTGGAATTACTTTGCGTAAGGCTCAATCTCTCCATGCTATTCCCATAAAATTATAA 1509 0.3685 MEFSVLLLISFFVFAIVHLLISNLVIKTQKSSTKLPPGPKPLPIIGNILELGTQPHQSLTKLSQTYGQIMTLKLGNITTIVISSPNLAKEVLHKNDLISTYRTVPDTLRALDHNIYSVGWMQPSNEWRILRKICATKVFSSQQLDSTQVLRQRKVQEMIDFIKKRSEKGKAIDVGEIAFITVLNFVSNTFFSMDLGDYNSSKSQEWKKNFCCITEEAGKPNVVDFFPIFRMLDPQGARARMTKYFRELIDFFDGLVEERLKLRSPEMETNQACKDVLDSVLQVMLEENSQVSRLHVLHLFLVLLVAGVETTSITIEWAMAELLKSPKNLEKIKNELQHVLGKDEQLEEKHISKLPFLKSVVKETFRLHPPAPLLVPHKSQEDVELCGFNVPKNAQIWVNVWAMGRDSSIWTNPNEFMPERFLESEIDFQGHDFELIPFGAGKRMCPGLPMAYRGVHILLGSLVHCFDWKLANEVKEEDLDMSENFGITLRKAQSLHAIPIKL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181334g00003 502 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 501 - -
Stsc181334g00003 502 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Stsc181334g00003 502 CDD CYP76-like 63 499 - -
Stsc181334g00003 502 SUPERFAMILY Cytochrome P450 31 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181334g00003 502 Coils Coil 329 349 - -
Stsc181334g00003 502 FunFam Cytochrome P450 76C4 27 498 - -
Stsc181334g00003 502 Gene3D Cytochrome P450 21 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181334g00003 Stsc-Chr181334 7561 10147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181334g00003 8 501 Cytochrome P450 AT2G45550 45.291 2.89e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181334g00003 - - gmx:100809483 649.047