Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181333g00006 ATGCAAGATATGATTATTTACTTTGCATCTGAGTACTATAAATTTAGGCTAATATACGTCACACATACGCGCTATGATTCCCTCCCAAAACTCCGCCACTCAAAAACCACGCAGGCAGGTATTCTATTTCCATCTCATGCAATAACCACCTCTGCTTCCTCTCTTTCTCCAACTCGATCCACTTTCCCGCCGATGTCCACCCTCACCGATCGCCGCCGTGTGTCCCCGGACCTCGACCTCGACACCGCAGAGCCTCTCACCTCCCAGCCTGAAACTGACACGCCTCCGATCAACAGAAACCGTCGCGTGACCGGAAAAAATAATGGCCTCCGGCACCGCCCGTCTCGTCGACGATCTCTCACCAGAGACATCGGCCACGTCGCCGCCGAGACCTACTTGGTTACTCGCCTCACATTTACGCTTCTTCAGTACCTCGGGATTGGTTACCGCTGGATTACGCAATTACTTGCCCTTGGATGTTATGCCATGCTTCTTATGCCTGGATTTCTACAAGTTGCATACTATTATTACTTCACTCGTAAGGTAAAGCGAAGCATTGTTTATGGTGATCAACCAAGAAATAGGTTGGATCTGTATTTACCTGCTGATATTGATAAGCCTAAGCCAGTTTTAATATTTGTAACCGGAGGAGCATGGATTATTGGGTATAAAGCGTGGGGCTCCCTTTTAGGACTACAGTTGGCAGAAAGAGACATTATAGTGGCCTGCATTGATTACAGAAATTTTCCTCAAGGAACAATCAGTGACATGGTAAATGATGCTTCTCAAGGAATTTCTTTTGTCATAAATAACATAGCTAATTATGGAGGTGATCCTAACAGGATATATTTGATGGGGCAATCTGCTGGTGCTCATATTTCTTCTTGTGCTTTACTGGACCAAGCAATCAAAGAAGCTGGAAAAGGAACTAAAGTTTCTTGGAGCATTTCCCAGCTAAAAGCTTATTTTGGTTTATCTGGAGGATATAACCTACTGGAATTAGTTGATCACTTCCACGATCGTGGCCTGTATCGTTCTATTTTTTTAAGTATCATGGAAGGTGAAGAATCTTTGAAGAGATTTTCTCCTGCAATCACAATTCAAGATCCAAGCATCAAACAATCCATTCCTCTCTTGCCTCCTATATATCTTTTCCATGGAACTGCTGACTATTCCATACCATCAGCTGCAAGTGAACGGTTTGCCGAGGCTCTAAAGAAGGCAGGAGCAAATGTGGAGCTGATTCTATATGATGGGAAAACTCATACAGATTTGTTCCTCCAAGATCCGTTGCGAGGCGGCAAAGACGACCTATTTGATCATATAGTTGATGTGATACATTCCAAGGACAAAGATGCTGTTACAAAGGGTAAAGTCCCACCACCAAGAAGAAGATTTGTTCCTGAGATTTTATTAAAGTTGGCTCGCAAGATCAGTCCCTTCTAA 1446 0.4385 MQDMIIYFASEYYKFRLIYVTHTRYDSLPKLRHSKTTQAGILFPSHAITTSASSLSPTRSTFPPMSTLTDRRRVSPDLDLDTAEPLTSQPETDTPPINRNRRVTGKNNGLRHRPSRRRSLTRDIGHVAAETYLVTRLTFTLLQYLGIGYRWITQLLALGCYAMLLMPGFLQVAYYYYFTRKVKRSIVYGDQPRNRLDLYLPADIDKPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERDIIVACIDYRNFPQGTISDMVNDASQGISFVINNIANYGGDPNRIYLMGQSAGAHISSCALLDQAIKEAGKGTKVSWSISQLKAYFGLSGGYNLLELVDHFHDRGLYRSIFLSIMEGEESLKRFSPAITIQDPSIKQSIPLLPPIYLFHGTADYSIPSAASERFAEALKKAGANVELILYDGKTHTDLFLQDPLRGGKDDLFDHIVDVIHSKDKDAVTKGKVPPPRRRFVPEILLKLARKISPF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181333g00006 481 MobiDBLite consensus disorder prediction 52 118 - -
Stsc181333g00006 481 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 178 430 - -
Stsc181333g00006 481 Pfam BD-FAE 196 405 - -
Stsc181333g00006 481 MobiDBLite consensus disorder prediction 85 104 - -
Stsc181333g00006 481 MobiDBLite consensus disorder prediction 52 68 - -
Stsc181333g00006 481 Gene3D alpha/beta hydrolase 175 430 IPR029058 -
Stsc181333g00006 481 SUPERFAMILY alpha/beta-Hydrolases 171 449 IPR029058 -
Stsc181333g00006 481 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 75 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181333g00006 Stsc-Chr181333 30172 35678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181333g00006 103 481 Carbohydrate Esterase AT1G26120 67.018 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181333g00006 K15889 - gmx:100788814 634.795