Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181331g00024 ATGCAAGTAAATAACAGCACCACCGCTGTGCCTACTGCTGCAATAATGGCACCAACCCTTCTTCCCACAACCAACCAAACCACTCACAAACACTCACATTCCAATTTCCCCTCCAAAACCATTCTCATTACCATCACTCTCCTCACCTCTCTTACCCTCTTCTTTGCCATTTTTCTTATTGCATTCATGCTCCGTCGTCTCAAATCCACCAACACTACTACTACCACTCCTTCCAAACATAATAACACCACCAACTCATTCCCCTCCCTCCCTTCAACAACATTGCCCTTCACTTCAAGTCCAGAAGTGAAGGGAGGATGTCTTCATCCAACACCAACACCAAAATTTCGAGGTGTTCAAGTGTTGACATATAAAGAGATAGAAGTGGCCACAGGTGGAATGAGTGATGGAAATGTAATAGGCAATGGAGACTCTGGTTTGGTGTACAAAGGTATCCTAAGTGATGGAACTTTGGCAGCCATTAAGCTTTTGCAGAGAGAAGGCAAGCAAGAGGAGCGTGCCTTCAGAATTGAGGTCGATATCCTAAGCCGTTTGCAATGTCCATATTTGGTAGAGTTACTAGGCTATTGTGCGGACCAGCACCATAGGGTGTTGGTATTTGAATACATGCCTAATGGAACACTCTATCACCATCTCCACTCTCTAAATAATCAATCTCAGCCGTTGGATTGGTGGACCCGGATGAGAATAGCCCTTGATTGTGCCAAGGCTTTGGAGTTCTTGCATGAACATGCTGCCTTCCCTGTCATACACCGTGACTTCAAGACTGCTAATGTTCTCTTGGATCAAAACTTTCGTGCTAAGGTCTCTCATTTTGGGTTGGCCAAGACTGGCTCCGACAAGATCAACGGTCAGATTTCCACCCGCGTCTTAGGCACCACTGGATATCTAGCGCCAGAGTATGCATCCACAGGAAAACTTACTACGAAATCAGATGTATATAGTTATGGCGTGGTTCTTCTGGAGCTGCTAACCGGGCGTGTACCAGTTGATATTAAGCGGCCTCCAGGAGAACATGTTCTTGTCTCTTGGGCCCTTCCAGGGTTAACAGACAGAGAAAAAGTGGTGGAAATGGTTGACCCTGCTCTTAGAGGACAGTACTCAAAGAAGGATCTAATTCAGATAGCAGCAATAGCAGCAATGTGCATACAGACAGAAGCAGATTACAGGCCACTAATGACGGATATTGTACAATCACTGATACCACTTGTTAGGAACCCTTCCTCCTCTTCTGTTACTTCTTCTTCATCTACTTCCCTAAGATTTCATAAAAGTCCAACCCATAGAAATTGCCCACCATAA 1323 0.4512 MQVNNSTTAVPTAAIMAPTLLPTTNQTTHKHSHSNFPSKTILITITLLTSLTLFFAIFLIAFMLRRLKSTNTTTTTPSKHNNTTNSFPSLPSTTLPFTSSPEVKGGCLHPTPTPKFRGVQVLTYKEIEVATGGMSDGNVIGNGDSGLVYKGILSDGTLAAIKLLQREGKQEERAFRIEVDILSRLQCPYLVELLGYCADQHHRVLVFEYMPNGTLYHHLHSLNNQSQPLDWWTRMRIALDCAKALEFLHEHAAFPVIHRDFKTANVLLDQNFRAKVSHFGLAKTGSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPGLTDREKVVEMVDPALRGQYSKKDLIQIAAIAAMCIQTEADYRPLMTDIVQSLIPLVRNPSSSSVTSSSSTSLRFHKSPTHRNCPP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181331g00024 440 SUPERFAMILY Protein kinase-like (PK-like) 115 407 IPR011009 -
Stsc181331g00024 440 FunFam Receptor-like serine/threonine-protein kinase ALE2 210 426 - -
Stsc181331g00024 440 CDD STKc_IRAK 140 410 - -
Stsc181331g00024 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Stsc181331g00024 440 MobiDBLite consensus disorder prediction 71 92 - -
Stsc181331g00024 440 Gene3D Phosphorylase Kinase; domain 1 109 209 - -
Stsc181331g00024 440 MobiDBLite consensus disorder prediction 413 440 - -
Stsc181331g00024 440 PANTHER OS07G0668900 PROTEIN 86 417 - -
Stsc181331g00024 440 Pfam Protein tyrosine and serine/threonine kinase 137 407 IPR001245 GO:0004672|GO:0006468
Stsc181331g00024 440 Gene3D Transferase(Phosphotransferase) domain 1 210 431 - -
Stsc181331g00024 440 MobiDBLite consensus disorder prediction 413 432 - -
Stsc181331g00024 440 ProSitePatterns Protein kinases ATP-binding region signature. 140 162 IPR017441 GO:0005524
Stsc181331g00024 440 ProSiteProfiles Protein kinase domain profile. 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181331g00024 Stsc-Chr181331 97674 99943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181331g00024 102 434 Receptor kinase-like Gene Family AT3G58690 61.721 1.55e-150 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Stsc181331g00024 PK_Tyr_Ser-Thr 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181331g00024 - - pcin:129299908 551.592