Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181331g00021 ATGGCCTTCTCTGCAATTGCATCATCATTCACACTGCTTCTCATTCTCATATTACTATTCTTCTTCGTGAATTTACCATCTTCTCCTTCTCTTTTCTCCACCGCCACCAAACGAAGGTCTCTTCTAACCACCACGTGCTCCGCCGACGACGGATCCAATGGCGGGATCCTCAACTACCTCTACCTCCACAACTGCCTATTCCGCCGCAACGCCTTCCTCTCCATCCCCGCCCTCTCCATGCTCCTCCTCCTCCAATTTTACATCCTCATCAAGACCGCGCAGCACCACTTCTCCGTCGTCACCACCAAGCTTGCCTCTCACCTCAACCTCTCCCCCTCCATGGCCGCCGTCACCCTCCTAGCCCTCGGCAACGGCTCCCCCGACGTATTCTCTTCCCTCGCCGCTCTCCGCTCTGGCCAGTACCGCACGGGATTCGGTGCCATCCTCTCCGCCGGTACCTTCGTCTCCGCCCTCGTTGTCGGATTCGTCGCCATCTATGCCGCTCCGTTCTCCCTCGATCCCGCGCCCTTCGTCAGGGACGTGCTGTTCTACTTGACGGCAGCGATGTTCCTCTTCTACGTTTATCTTAGCGCCGAGATCTTCCTCTGGCAGGCGATTGCATTCGTAGGGTTTTACGCGTTTTTCGTTGGACTCGTGTTCTATATGGACTTAGGAGTAGGAGATGGCAGAGGCAAGAGTGGGAATTCGTCCACAGATCTTGAGGAGCAGAAGGAATTAGCACCGGTGGTCGTTGACTCCGACGTCACAGTTTCAGGATCTATGAACGACGAGAAGCGCAGTTCCGGATTCCCGGGAGCTTGTAGATTGATTTCTAAAGCATGGGAGGTTCCTGTTGCAACTCTCTTGAAACTGTCAATCCCCCAACCAGCTCCGTCGCAATGGAGCAGACTTTACTCGTCGGCCAACATCGCTCTTTGTCCGATTGCCCTCTTGTATGCCTGCAAATCATTCGTGCCATTTGATCATCCCATAGCCTTCCTCCTCCCCAACACTGACTTCCCCCTCTGGTCAGTAGTTCTTACCACAAGCTTCTGCCTTGCATTGCTTCATTTTGTGATAGAAAAAGAACCCCCCAAAACGGAGCAATTACCTGTTGTTGTCATGGCATTTGTCATGAGTGTGTTTTGGATATCTACCGCAGCTGGAGAACTGGTGAACTGCCTTGAAACTTTAGGTCTTGTTCTCAAACTGCCACCGGCAATCCTCGGTCTGACGGTGCTGGCATGGGGCAATTCGGTGGGGGATCTAGTCGCGGATGTAGCAGTTGCTAAAGCCGGCCATCCGGCTATGGCAATGGCTGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTAGGTCTTGGATCAGCTTTGGTGATTCAGACTGCTAATATTTACCCTAAAGCTTATGTGCTTAATTTCCACATTGGAATCGTGATTGCATTTGTGTTCCTGCTTTTAAGCCTTATGGGGTCTCTCTTAGTGATCACTTGGTACAGATTCCGAGTGCCTAGGTTTTGGGGGTTTTGTCTGGTCGGCCTCTATGTTGTTTTTGTAGCAGTGAGTTTGATGGTAGCCATGTTTTCAGGGTGA 1593 0.5173 MAFSAIASSFTLLLILILLFFFVNLPSSPSLFSTATKRRSLLTTTCSADDGSNGGILNYLYLHNCLFRRNAFLSIPALSMLLLLQFYILIKTAQHHFSVVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRSGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSLDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAIAFVGFYAFFVGLVFYMDLGVGDGRGKSGNSSTDLEEQKELAPVVVDSDVTVSGSMNDEKRSSGFPGACRLISKAWEVPVATLLKLSIPQPAPSQWSRLYSSANIALCPIALLYACKSFVPFDHPIAFLLPNTDFPLWSVVLTTSFCLALLHFVIEKEPPKTEQLPVVVMAFVMSVFWISTAAGELVNCLETLGLVLKLPPAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTANIYPKAYVLNFHIGIVIAFVFLLLSLMGSLLVITWYRFRVPRFWGFCLVGLYVVFVAVSLMVAMFSG 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181331g00021 530 Gene3D - 110 238 IPR044880 -
Stsc181331g00021 530 Gene3D - 304 525 IPR044880 -
Stsc181331g00021 530 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 277 528 - -
Stsc181331g00021 530 Pfam Sodium/calcium exchanger protein 374 523 IPR004837 GO:0016020|GO:0055085
Stsc181331g00021 530 Pfam Sodium/calcium exchanger protein 79 219 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181331g00021 Stsc-Chr181331 84580 86916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181331g00021 8 529 Antiporters AT1G08960 66.543 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181331g00021 K13754 - gmx:100775437 761.525