Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181329g00007 ATGGCTGCTGCGGCACCGCCACCACCACCAACTCCAGTTCCTGAGCCGTCCATGGGACCGTCCGAAGATTCCCCATTGGGTCACCCAATCTTCACTCGAATCCGTTTAGCTACCGCTTCCGACGTGCCCCACATCCACAAGATGATCCACCAGATGGCCGTTTTCGAGCGTCTTACCCATCTTTTTTCTGCTACCGAGTCCTCTCTTACTAGTACACTCTTCTCTCCCACTGCCAAACCCTTCTACTCTTTCACTGTCTTCTTGCTGGAAGTCTCACCCAATCCCTTTACCGACTATGTGATAACTGATCCTTCTTTCACGCCTCTTGTAAAGGTCATAAACTTGGATCTCCCAATTGAAGACCCTGAAAAAGAGAGCTTCACAACAAATCCTGTCCATGACATTTCTGTTGCTGGATTTGTTCTGTTCTTCCCCAACTACTCTACTTTCTTGGCAAAACCTGGGTTTTATGTGGAAGACCTATTTGTGAGGGAGTGTTATAGGAGGAAAGGGTTTGGAAAGATGTTGCTTTCAACTGTGGCAAAACAGGCCGTAAAGATGGGATATGGGAGGGTGGAGTGGGTTGTGCTGGATTGGAATATGAATGCAATCAAATTTTATGAGGAAATGGGAGCCAAGATCCTACAAGAGTGGAGGGTTTGCAGGTTAACTGGTGACGCCCTTGAGGCCTATGGTACTACTGACTAA 708 0.4774 MAAAAPPPPPTPVPEPSMGPSEDSPLGHPIFTRIRLATASDVPHIHKMIHQMAVFERLTHLFSATESSLTSTLFSPTAKPFYSFTVFLLEVSPNPFTDYVITDPSFTPLVKVINLDLPIEDPEKESFTTNPVHDISVAGFVLFFPNYSTFLAKPGFYVEDLFVRECYRRKGFGKMLLSTVAKQAVKMGYGRVEWVVLDWNMNAIKFYEEMGAKILQEWRVCRLTGDALEAYGTTD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181329g00007 235 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 89 235 IPR000182 GO:0016747
Stsc181329g00007 235 FunFam probable acetyltransferase NATA1-like 32 234 - -
Stsc181329g00007 235 Pfam Acetyltransferase (GNAT) family 136 211 IPR000182 GO:0016747
Stsc181329g00007 235 CDD NAT_SF 137 193 - -
Stsc181329g00007 235 PANTHER DIAMINE N-ACETYLTRANSFERASE 32 231 - -
Stsc181329g00007 235 Gene3D - 32 235 - -
Stsc181329g00007 235 MobiDBLite consensus disorder prediction 1 25 - -
Stsc181329g00007 235 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 33 225 IPR016181 -
Stsc181329g00007 235 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181329g00007 Stsc-Chr181329 33639 34346 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc181329g00007 Acetyltransf_1 4.8e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181329g00007 K22883 - cit:102606670 334.339