Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181329g00004 ATGGCCGTTTTCGAGGGTACCCATCTTTTTTCTGCTACCGAGTCCTCTCTTACTAGTACACTCTTCTCTCCCACTACCAAACCCTTCTACTCCTTCACTGTCCTCTTGCTGGAAGTCTCACCCAATCCTTTTACCGACTCTGTGATAGCTGATCCTTCTTTCACGCCTCTTGTAAAGGTCATAAACTTGGATCTCCCAATTGAAGACCCTGAAAAAGAGAGCTTCACAACAAATCCTGTCAATGACATTTCTGTTGCTGCATTTGTTCTGTTCTTTCCCAATCACTCTACTTTCTTAGCAAAACCTGGGTTTTACGTGGAAAACCTACTTGTGAGAGAGTGCTATAAGAGGAAAGGGTTTGGAAAGATGTTGCTTTCCACCGTGGCAAAGCAGGCCGTAAAGATGGGGTATGGGAAGGTGGATTGGGTTGTGCTGGATTGGAATATGAATGCCATCAAATTTTATGAAGAAATGGGAGCCAAGATCATATAA 492 0.437 MAVFEGTHLFSATESSLTSTLFSPTTKPFYSFTVLLLEVSPNPFTDSVIADPSFTPLVKVINLDLPIEDPEKESFTTNPVNDISVAAFVLFFPNHSTFLAKPGFYVENLLVRECYKRKGFGKMLLSTVAKQAVKMGYGKVDWVVLDWNMNAIKFYEEMGAKII 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181329g00004 163 Gene3D - 1 163 - -
Stsc181329g00004 163 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 85 163 IPR000182 GO:0016747
Stsc181329g00004 163 CDD NAT_SF 80 140 - -
Stsc181329g00004 163 PANTHER DIAMINE N-ACETYLTRANSFERASE 4 163 - -
Stsc181329g00004 163 Pfam Acetyltransferase (GNAT) family 85 159 IPR000182 GO:0016747
Stsc181329g00004 163 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 85 162 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181329g00004 Stsc-Chr181329 22725 23216 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc181329g00004 Acetyltransf_1 6.4e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181329g00004 K22883 - cit:102606670 211.075