Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181326g00016 ATGGCCAAAATTTACACCTTTGAGGAAGTGGGTAAGCACAATCAGAAAGATGATTGTTGGATTATTATCCACGGCAAGGTCTATGATGTGACCTCATTTTTGTATGATCATCCTGGAGGTGGTGATGTTTTCCTAGTGGCTCCTGATGAAAAAGATACTTCTGTTGGATTTGATGAAGTTGGCCATAGTGAAGCTGCTATAGAAATGTTGGAAACATACTTCGTTGGGAATGTTGACGGTGACACCATTACTTCTAAGACTGTTGCCGGAGAAGATAACCATGCCCCAACGCAACACACATATGCGCCTCCGTCCACCAATGATAATGACTTCATTGTGAAGTTCTTGATAGCATTGCTCATGTTTGCCTTGCCATTTGTTCTTCAGTACTATTATGGCAAGGGAAGCAACAAGTCTCCCAATGGTGATAATTGA 435 0.4184 MAKIYTFEEVGKHNQKDDCWIIIHGKVYDVTSFLYDHPGGGDVFLVAPDEKDTSVGFDEVGHSEAAIEMLETYFVGNVDGDTITSKTVAGEDNHAPTQHTYAPPSTNDNDFIVKFLIALLMFALPFVLQYYYGKGSNKSPNGDN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181326g00016 144 PRINTS Cytochrome B5 signature 37 51 IPR001199 -
Stsc181326g00016 144 PRINTS Cytochrome B5 signature 27 37 IPR001199 -
Stsc181326g00016 144 PRINTS Cytochrome B5 signature 66 78 IPR001199 -
Stsc181326g00016 144 SMART Cyt_b5_2 5 79 IPR001199 -
Stsc181326g00016 144 FunFam Cytochrome b5 type B 1 83 - -
Stsc181326g00016 144 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 2 83 IPR036400 -
Stsc181326g00016 144 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 2 79 IPR001199 -
Stsc181326g00016 144 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 33 40 IPR018506 GO:0020037
Stsc181326g00016 144 Gene3D - 1 83 IPR036400 -
Stsc181326g00016 144 PANTHER CYTOCHROME B5 3 131 - -
Stsc181326g00016 144 Pfam Cytochrome b5-like Heme/Steroid binding domain 6 78 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181326g00016 Stsc-Chr181326 90087 90890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181326g00016 3 134 NADPH P450 reductases AT5G53560 42.222 3.19e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181326g00016 K23490 - aip:107648062 223.016