Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181326g00014 ATGACCACGGCAATAGCGATCGAAGACGTTCGTAGAGAGGTGAAGCTATTAAAAGCTCTATCTGGCCATCAGCATCTTGTCAAATTTTATGATGCTTACGAGGATGCCAACAACGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACCGGATTTTGTCAAGGGGGGGAAGATATACAGAGGAGGACGCAAAGGTTATAGTTTTGCAGATTCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACCTAAAGCCTGAGAATTTTCTCTTCACTTCAAGGAGCGAAGATGCTGATATGAAGCTTATAGATTTTGGTCTATCTGATTTCATCAGGCCAGATGAACGGTTGAATGACATTGTTGGGAGTGCATATTATGTTGCCCCTGAGGTCCTTCACAGGTCATATAGTCTAGAAGCAGATATATGGAGCATTGGTGTTATCACCTACATCTTACTTTGTGGAAGTCGGCCTTTCTGGGCTCGAACAGAATCTGGAATTTTTCGCGCAGTGCTCAGAGCTGATCCTAACTTCGATGATCTACCCTGGCCAACTGTGTCTTCAGAGGCTAAGGATTTTGTCAAAAGGCTCTTAAACAAGGACTACAGGAAAAGAATGACCGCTGTCCAAGCTCTAACTCACCCTTGGTTAAGGGATGACAGTCGTCCTATTCCGTTAGATATATTAATTTATAAACTAGTGAAGTCATATCTTCATGCGACACCATTCAAGCGTGCAGCAGTGAAGGCCCTTTCGAAAGCCTTGACAGAGGATGAATTAGTTTATCTTAGAGCACAATTCAGATTGTTGGAACCAAATAGAGATGGGCATGTCTCCCTTGACAATTTCAAAATGGCTCTTGCACGCCATGCCACTGATGCCATGAGGGAGTCAAGGGTTCTCGATATCATACATGCGATGGAACCACTTGCCTATAGGAAGATGGATTTCGAAGAATTCTGTGCCGCTGCTATTAGCACTTATCAACTGGAGGCACTTGATAGGTGGGAAGATATTGCCAACACTGCTTTTGAGCATTTTGAGATAGAAGGCAACGGTGTGATATCAGTTGAAGAGTTAGCAAGAGAGTTGAATCTTGGCCCTTCAGCTTATACCATTCTCAAAGATTGGATACGAAATACTGATGGGAAGCTTAGTTTACTTGGATATACAAAATTCTTACATGGCGTGACTCTCCGGTCAAACCCAAGACATCGTTGA 1242 0.4324 MTTAIAIEDVRREVKLLKALSGHQHLVKFYDAYEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSSEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDSRPIPLDILIYKLVKSYLHATPFKRAAVKALSKALTEDELVYLRAQFRLLEPNRDGHVSLDNFKMALARHATDAMRESRVLDIIHAMEPLAYRKMDFEEFCAAAISTYQLEALDRWEDIANTAFEHFEIEGNGVISVEELARELNLGPSAYTILKDWIRNTDGKLSLLGYTKFLHGVTLRSNPRHR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181326g00014 413 Gene3D Transferase(Phosphotransferase) domain 1 51 232 - -
Stsc181326g00014 413 Pfam Protein kinase domain 8 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181326g00014 413 SUPERFAMILY EF-hand 250 403 IPR011992 -
Stsc181326g00014 413 SUPERFAMILY Protein kinase-like (PK-like) 8 246 IPR011009 -
Stsc181326g00014 413 FunFam CDPK-related kinase 1 2 50 - -
Stsc181326g00014 413 CDD STKc_CAMK 6 223 - -
Stsc181326g00014 413 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181326g00014 413 Gene3D - 233 404 - -
Stsc181326g00014 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Stsc181326g00014 413 SMART serkin_6 3 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181326g00014 413 FunFam CDPK-related kinase 1 260 332 - -
Stsc181326g00014 413 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 389 - -
Stsc181326g00014 413 ProSiteProfiles EF-hand calcium-binding domain profile. 265 300 IPR002048 GO:0005509
Stsc181326g00014 413 FunFam CDPK-related kinase 1 52 238 - -
Stsc181326g00014 413 Gene3D Phosphorylase Kinase; domain 1 3 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181326g00014 Stsc-Chr181326 70445 74723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181326g00014 1 408 EF-hand Containing Proteins AT2G46700 81.863 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc181326g00014 Pkinase 1.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181326g00014 K13412 - gmx:100796256 764.607