Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181326g00002 ATGCTTTCCATTTGTTTTGCTAACAATGATGATCCTAAACTTCACATTGTTTATTTGGGTTCATTACCTGAAACGACAAATTCTTATTCTCCCACCTCTCACCATCTCAATACACTGCAACAAGTTCTTGATGGAAGCAACCCAACAAAATCCTTAGTCCACAGTTACAAGATAAGTTTTAATGGTTTTGCTGCTATGCTCACGAATGAGCAAGCGGCAAAGCTAGCCGAAATGGAAGGTGTTCTGGTGCGGAAGTGGAACGGTTCGGCCGTCCGAGAACTTCGCAGATGGGCTCTTCGTGGACTTCCAATAAAGGCAGCAAAAAGACAGCAAAATATAGAAAGCAATCTCATTGTTGGAGTCATCGACACCGGTATTTGGCCTGAATCAGAAAGCTTCAGCGACGAAGGTATCACGGTCCCCGTTCCGAAAAAGTGGAAGGGTACTTGTGCAGGTGGCAAGAACTTTACGTGCAACAAGAAGTTAATTGGAGCAAGATTCTACGTAGATGACTCTGCAAGAGATAGTCAGGGACACGGAAGTCACACAGCATCAATAGCAGCTGGAAATAATGTTGACAATGTTGGCTTTTATGGCATTGCACAAGGCACAGCAAGGGGAGCGGTTCCTTCGGCAAGAATTGCGGCTTACAAAGTATGCGGTGCAGGTTGTGATGACCACAGTATTTTAGCTGCATTTTATGACGCAATTGCTGACGGAGTTGACATCATTTCCATTTCAATTGGACATGGTTTCCCAATGAAATTGGAAAACGATTCTGTTGCCATTGGTTCATTTCATGCAATGGCCAAAGGGGTACTTGTAGTCACCGGTGCTGGAAATTCAGGTCCTAAACCTGGCACTGTATCAAACCTAGCTCCATGGATGCTAAGCGTTGCAGCAAACACCATAGATCGCCAAATCATCGACAAGGTCATTCTTGGCGATAGAAAGGTGTTAACAGGGAGTTCGATTAATCCTTTCAAGTCAAATGGAACAAAAATCCCAATAGCTTTAAGCAATGGGGATTCAAATAAATGTCCAAAAGAAGACTTTATCAAATGCTGGTGCTTGGATGAAAACTTGGTGAAAGAAAAGATAGTTTTATGCGACATTTATCCTAACCCGTATAATATCAAGGACGGCCTGGATGGTGTAATTATAAAAGAAGATGGTACTCTTCCAACACCAAGAATCCCTTTTTTGCCTTTACTGATATTGTCGCAAAAAGATTATGAATTTGTTAAATCCTACATAAACTCAACAAAAGGTCCAAGAGCTGAGATACTCAAGAGTGAGATCGTTAGAGATAATAATGCTCCTAAAGTGGCTGCATTTTCTTCCCGTGGACCAGACCCTTTGATTCCAGAGATCTTGAAACCGGATGTAAGTGCCCCAGGAGTTGACATATTGGCTGCTTATTCGCCGATTTCTTCACCAACAGTAGGAGTTCCTGATGAAAGTGATAACAGATCTGTGGATTACAGTATTTTAAGTGGGACTTCAATGGCTTGTCCTCATGTTTCTGGAATAGCCACATATGTGAAAAGCTTTCACCCTGATTGGTCACCTGCGGCAATTAAATCTGCGATTTTAACGTCAGCAAAACCCATGGTTAGGAGCTCGGTGCATGATGTGGGAGAATATGCATATGGATCTGGACAAGCCAATCCAATTCAAGCAATCAACCCCGGACTTGTTTATGACATTAACAAGGGAGATTATGTGCAAATGTTGTGCAACTTGAGGTATGATAATGGAAAAATTAAATTGATAACAGGAGAGATGAATCCATGCAAGGGAGCTGGAGATATATCATTGCAAGCCACATCACTCGCCCTCAATCTCACTTTCTCATTCGCGTCCACAAGAGTTGCCGCTGACATTCCTTCGTGCCGCCGTGTTCGCCTCTGCCTTCCAGCCGTCGCGGACTCGTGTCCAGCCCCTGACCTCCAGCCTTCACGTCCCTGCAGCCTTCACGCCCTCGTGCCTCCAACATCTCTTTATTAA 2010 0.4368 MLSICFANNDDPKLHIVYLGSLPETTNSYSPTSHHLNTLQQVLDGSNPTKSLVHSYKISFNGFAAMLTNEQAAKLAEMEGVLVRKWNGSAVRELRRWALRGLPIKAAKRQQNIESNLIVGVIDTGIWPESESFSDEGITVPVPKKWKGTCAGGKNFTCNKKLIGARFYVDDSARDSQGHGSHTASIAAGNNVDNVGFYGIAQGTARGAVPSARIAAYKVCGAGCDDHSILAAFYDAIADGVDIISISIGHGFPMKLENDSVAIGSFHAMAKGVLVVTGAGNSGPKPGTVSNLAPWMLSVAANTIDRQIIDKVILGDRKVLTGSSINPFKSNGTKIPIALSNGDSNKCPKEDFIKCWCLDENLVKEKIVLCDIYPNPYNIKDGLDGVIIKEDGTLPTPRIPFLPLLILSQKDYEFVKSYINSTKGPRAEILKSEIVRDNNAPKVAAFSSRGPDPLIPEILKPDVSAPGVDILAAYSPISSPTVGVPDESDNRSVDYSILSGTSMACPHVSGIATYVKSFHPDWSPAAIKSAILTSAKPMVRSSVHDVGEYAYGSGQANPIQAINPGLVYDINKGDYVQMLCNLRYDNGKIKLITGEMNPCKGAGDISLQATSLALNLTFSFASTRVAADIPSCRRVRLCLPAVADSCPAPDLQPSRPCSLHALVPPTSLY 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181326g00002 669 Gene3D Peptidase S8/S53 domain 117 575 IPR036852 GO:0004252|GO:0006508
Stsc181326g00002 669 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 5 85 IPR037045 -
Stsc181326g00002 669 Gene3D - 305 436 - -
Stsc181326g00002 669 Pfam Subtilase family 115 536 IPR000209 GO:0006508|GO:0008236
Stsc181326g00002 669 PRINTS Subtilisin serine protease family (S8) signature 499 515 IPR015500 -
Stsc181326g00002 669 PRINTS Subtilisin serine protease family (S8) signature 175 188 IPR015500 -
Stsc181326g00002 669 PRINTS Subtilisin serine protease family (S8) signature 114 133 IPR015500 -
Stsc181326g00002 669 CDD Peptidases_S8_3 112 535 IPR034197 -
Stsc181326g00002 669 SUPERFAMILY Subtilisin-like 97 566 IPR036852 GO:0004252|GO:0006508
Stsc181326g00002 669 CDD PA_subtilisin_like 312 429 - -
Stsc181326g00002 669 ProSiteProfiles Serine proteases, subtilase domain profile. 96 562 - -
Stsc181326g00002 669 Pfam Peptidase inhibitor I9 15 81 IPR010259 -
Stsc181326g00002 669 ProSitePatterns Serine proteases, subtilase family, serine active site. 500 510 IPR023828 -
Stsc181326g00002 669 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 616 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181326g00002 Stsc-Chr181326 10693 15378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181326g00002 19 599 Subtilisin-like Serine Gene Family AT5G59190 53.299 0.0 575