Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181325g00012 | ATGGGTATGTCTACTGCTGCTTCACAGTTTCATGTTTTGGCGGTTGATGACAGCCTAATTGATAGAATGCTCATTGAGAGGCTCCTTAAAACCTCTTCATTCCATGTTACTACAGTGGACTCTGCTGTTAAGGCTTTACAATACCTTGGTTTGGTTGAAGATAAACTAAGGAGTTATCACACTAATTCTGAAATTCATCATCAGGATGTGGAAGTTAATGTAAATCTGATCATAACAGATTACTGTATGCCAGAAATGACTGGCTATGATCTGCTAAGAAAAATCAAGGAATCAAATTATCTTAAAGACATACCTGTTGTGATCATGTCTTCGGAGAATGTTCCATCAAGGATCAATAGATGCTTGGAAGATGGGGCTGAAGAATTTTTTCTGAAACCCGTTCAACAATCAGATGTGAACAAGCTCAAGCCCCATTTATTGATGAAATCAAGAGCTAAAGAAGAAGAGGAGGAAACCCAACCCATCAACAACAATAACAAGAGGAAAAGCATGGTTGAAAGCCAATCCCCAGATAAAACAAGAATTAAGTGTATCATTTAA | 561 | 0.3761 | MGMSTAASQFHVLAVDDSLIDRMLIERLLKTSSFHVTTVDSAVKALQYLGLVEDKLRSYHTNSEIHHQDVEVNVNLIITDYCMPEMTGYDLLRKIKESNYLKDIPVVIMSSENVPSRINRCLEDGAEEFFLKPVQQSDVNKLKPHLLMKSRAKEEEEETQPINNNNKRKSMVESQSPDKTRIKCII | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181325g00012 | 186 | ProSiteProfiles | Response regulatory domain profile. | 11 | 147 | IPR001789 | GO:0000160 | |
Stsc181325g00012 | 186 | Pfam | Response regulator receiver domain | 12 | 139 | IPR001789 | GO:0000160 | |
Stsc181325g00012 | 186 | MobiDBLite | consensus disorder prediction | 150 | 181 | - | - | |
Stsc181325g00012 | 186 | Gene3D | - | 11 | 183 | - | - | |
Stsc181325g00012 | 186 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 10 | 173 | IPR045279 | GO:0009736 | |
Stsc181325g00012 | 186 | SMART | REC_2 | 10 | 146 | IPR001789 | GO:0000160 | |
Stsc181325g00012 | 186 | CDD | REC_typeA_ARR | 12 | 142 | - | - | |
Stsc181325g00012 | 186 | SUPERFAMILY | CheY-like | 9 | 145 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181325g00012 | Stsc-Chr181325 | 101330 | 103739 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181325g00012 | 1 | 165 | Response Regulator Gene Family | AT3G57040 | 61.988 | 1.63e-67 | 204 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Stsc181325g00012 | Response_reg | 1e-18 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181325g00012 | K14492 | - | gmx:100787436 | 261.536 |