Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181322g00006 | ATGGTTTTCCCTTCTATCCCACTCTATTTAGATCCTCCCACCAATTGGCACCAGCAGCAACCAAGTCAACAACATCATCATCATCACCAGGCAATAAATGGCAATGAAAGTTCGTCTGAGCTGCTCCCTCAGTTGCCGCCCCTGCAAGCACAGGGCCCTCAGATGGGCTCAGTTAGGCCCGGGCCGACGGGAGATCGGGGACAAATAGCGAAGATATCATCAGGAGGAGGAGGAGAGGGAGCATTGAAGTGTCCTCGGTGCGAATCAAGCAACACAAAGTTCTGCTACTTCAACAACTACAGCCTGTCTCAGCCGCGACACTTCTGCAAGACGTGTAGGCGTTACTGGACAAGAGGCGGCGCCCTTAGGAACGTCCCCGTCGGTGGCGGTTGCCGGAGAAGCAAGAAGACCAAGAGGAGTAGTAGCCAGTCCAAGTCACCGGCACCACCAGCAGCAACAGCAGCAAACACTGAAAAGCAGTCATCCTCAGTTCCTTCATCAGGTTTTAACAACAACCGAGGTTTCATGGCTTCTCTTGAGAATATGAGCCTCTATGGAGGAGGAGGAGTAGAACAGTGGCGGTTGCATCAGCATCAGCAGCAATTTCCAAATTTGTTGAGTGGTTTTGATCCAATAACTAGTTCTTCTTCGTTCCCTTTGGTGCAGAGTAGTGTTATTGAAGGTGGCTTGTTTGGAGAATCTAGGGTTAAAATGGAATCTGGGAACGGAGGCCTATTAAGCAGTAATTTGTCAAGAATATCCCCTCTCATGAGTTTTACAGAGAATTATTCATGGACTGATCTTGCCGCATCATCTTCTTCCGCTGCTCATCATCTCTTCTGA | 843 | 0.4935 | MVFPSIPLYLDPPTNWHQQQPSQQHHHHHQAINGNESSSELLPQLPPLQAQGPQMGSVRPGPTGDRGQIAKISSGGGGEGALKCPRCESSNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKTKRSSSQSKSPAPPAATAANTEKQSSSVPSSGFNNNRGFMASLENMSLYGGGGVEQWRLHQHQQQFPNLLSGFDPITSSSSFPLVQSSVIEGGLFGESRVKMESGNGGLLSSNLSRISPLMSFTENYSWTDLAASSSSAAHHLF | 280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181322g00006 | 280 | MobiDBLite | consensus disorder prediction | 12 | 45 | - | - | |
Stsc181322g00006 | 280 | MobiDBLite | consensus disorder prediction | 141 | 169 | - | - | |
Stsc181322g00006 | 280 | Pfam | Dof domain, zinc finger | 81 | 136 | IPR003851 | GO:0003677|GO:0006355 | |
Stsc181322g00006 | 280 | ProSitePatterns | Zinc finger Dof-type signature. | 84 | 120 | IPR003851 | GO:0003677|GO:0006355 | |
Stsc181322g00006 | 280 | ProSiteProfiles | Zinc finger Dof-type profile. | 82 | 136 | IPR003851 | GO:0003677|GO:0006355 | |
Stsc181322g00006 | 280 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 35 | 180 | IPR045174 | GO:0003700|GO:0006355 | |
Stsc181322g00006 | 280 | MobiDBLite | consensus disorder prediction | 126 | 169 | - | - | |
Stsc181322g00006 | 280 | MobiDBLite | consensus disorder prediction | 11 | 82 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181322g00006 | Stsc-Chr181322 | 31507 | 32880 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181322g00006 | 1 | 138 | C2C2-Dof Transcription Factor Family | AT2G37590 | 50.658 | 1.26e-40 | 141 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Stsc181322g00006 | zf-Dof | 2e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181322g00006 | - | - | adu:107461669 | 238.81 |