Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181321g00019 ATGGCTTTCTCACCAGACTCTTCTCGCCGCAACTCCCTCATACCTTCCTTCCTTTACTCTTCCTCTTCCTCCACCAAAACCCTACCCTTCCAGAAGATTCTCAACTCCCCCTCCTCCTCACCCGCGGCAGCTCCTTCCGCCGGCAGCGGTGGTGCCTTCATGATTCCCTCTCCCAGCGAGCCCGGCAAGATCGAGATGTACTCCCCGGCCTTCTACGCCGCCTGTACCGCCGGAGGTATCCTCAGCTGCGGTCTCACTCACATGGCCGTCACTCCTCTCGACCTTGTCAAGTGTAATATGCAGATTGACCCTACCAAGTACAAGAGTATCTCCTCTGGTTTTGGAGTTCTGATGAAGGAGCAGGGACTCAGGGGCTTCTTCAGGGGATGGGTTCCAACTTTGCTTGGTTACAGTGCTCAAGGTGCTTGCAAGTTTGGATTTTATGAATTCTTCAAAAAGTACTACTCTGATCTGGCTGGTCCGGAATATGCATCCAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTTATTGCTGATGTTGCACTTTGCCCATTCGAAGCCGTGAAGGTCCGTGTTCAAACTCAGCCTGGATTTGCTAGGGGTCTGGCTGATGGGTTACCGAAGTTCGTCAGATCTGAAGGAACTATGGGATTGTACAAGGGATTGGTGCCTCTGTGGGGACGACAGATTCCATACACAATGATGAAGTTTGCTTCCTTTGAGACCATTGTGGAGATGATCTACAAGCATGCCATCCCCACACCAAAGAATGAGTGTAGCAAGGGTCTGCAACTCGGTGTGAGTTTTGCTGGTGGATATGTTGCGGGTGTGTTCTGTGCCATTGTGTCACATCCAGCCGATAACCTTGTCTCTTTCCTTAACAATGCCAAGGGAGCAACAGTTGGTGATGCTGTGCAGAAGCTTGGTTTGTGGGGTCTCTTCACCCGAGGTCTCCCTCTCCGCATTGTTATGATTGGAACACTTACAGGAGCTCAATGGGGAATATATGATGCTTTCAAGGTCTTCGTGGGACTGCCAACCACCGGTGGTCCTGCTCCTGCTGCTGTTCCTACTCCTTCTGGTGCTGAGCTTGCAAAGGCTTAG 1119 0.5139 MAFSPDSSRRNSLIPSFLYSSSSSTKTLPFQKILNSPSSSPAAAPSAGSGGAFMIPSPSEPGKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPTKYKSISSGFGVLMKEQGLRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVRSEGTMGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKHAIPTPKNECSKGLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVQKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAVPTPSGAELAKA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181321g00019 372 Gene3D Mitochondrial carrier domain 70 348 IPR023395 -
Stsc181321g00019 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 52 358 IPR044677 GO:0005315|GO:1990547
Stsc181321g00019 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 167 251 IPR018108 -
Stsc181321g00019 372 FunFam Phosphate carrier protein, mitochondrial 70 348 - -
Stsc181321g00019 372 SUPERFAMILY Mitochondrial carrier 73 343 IPR023395 -
Stsc181321g00019 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 154 IPR018108 -
Stsc181321g00019 372 Pfam Mitochondrial carrier protein 169 255 IPR018108 -
Stsc181321g00019 372 Pfam Mitochondrial carrier protein 73 156 IPR018108 -
Stsc181321g00019 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 268 347 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181321g00019 Stsc-Chr181321 119861 123035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181321g00019 7 359 Chloroplast and Mitochondria Gene Families AT5G14040 80.769 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181321g00019 K15102 - gmx:548006 612.453