Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181320g00015 ATGGAAGCCAAGCCTCTTGAAGCTGTTCCCCTTTCACACAACACCACTCCTGGTGGACCCCAGAAGAAGATTGACATGGGACAAAAGATGGAAGGTGGTGGTGGTGTTGAACTGATCAAGGAAAAGAAGAACAACACATCAAGTTTTGAAATTGGTGATGGGTTTGGAGGTGCTTCTGCTAAGAACACTGAAACACTGAAGACAAGAAAAGAAGAAGAAGAAGGAAATAAAAGAAAACCTGCTTTGAACAACAAAGCATGCCAACAACAACAAGATAGATGTGGTTTCTTGTTCACAGAAGCTCAAAGGCGTGAACTTCACCATCAAGTTCTCATCTTTAACTACTTTGCTTCTTATATCCCTCTCCCTCTCCCTCTATCCTATCATCATCACCTTGTTCCACCCTTTGGTTCTGGCTTTGGTGTTTTTCCTAATCAATTTCCAATCTATATGGCAGAATACAATAATTACCAGTGTTTTGACTATGGAAGCATGATGGAGCCTGAACCGAATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGCAGTAAGAACACATTACCTGGTCATAAGTATTGTGAACGACACGTCAATAGAGGTCGGAACCGTTCAAGAAAGCCTGTGGAAACATCTGATGTTAACTCAGATTCGATAACAAAACCTTGTAACAAGCTACCTACCACCATAGTCTCAAACACAGAATCTGCTGTTTCAATTCCAACCCCTGGCCCTAAGGTAATAAACTTTGGCAACATGGTATCAGTTGTTTCGGATAACAGAAGTAGCCTAGACTTAAGCAAGAAGGATAATGGGATCAAGAGCTGTGTCGGCTACAGTATCAGTGTAATTAGTAGTGGCAAAGGAAGTGTTACTTATGATGGTACTAATTGCATCTCTGCTGGTGCTGGCATAGGCTTCTCCCCAAGGAGTGTTCTCCAAGTTTCTGGTTGCAATAGTTCACACTGCACCTACGGAAACAGTATAGACCTTGAACCAGGCAGGTGCCGGAGAACAGACGGCAAGAAGTGGCGGTGCAAAAGTGCCGTTCTTCCTGGTCATAAGTATTGCACCTCTCACGTGCACAGAGGATCTAAAAGGCGTTCGACGGATCGTGAGCCACCCACTACTACTCCTACTCCTACTCCTCAATCTGCCAATACCAATTCTGCCAATACCAATTCTCCGCCGGTTTACTCTGTAGCGGAGATGACAATAACAACCGAAGATAGGGAAGCAGTTTGCAAAATTCCCAACACAAGTCTTTCAATGTCAATCCCTGCAAGTGCACCATTGACACATAACAATGGGAAGAGTCCAAATAGCAGCAGTGACACAGACACCACCATCAGTGACACTATCAATGAGTGTAGCTATGCTTCTTTCTAA 1389 0.437 MEAKPLEAVPLSHNTTPGGPQKKIDMGQKMEGGGGVELIKEKKNNTSSFEIGDGFGGASAKNTETLKTRKEEEEGNKRKPALNNKACQQQQDRCGFLFTEAQRRELHHQVLIFNYFASYIPLPLPLSYHHHLVPPFGSGFGVFPNQFPIYMAEYNNYQCFDYGSMMEPEPNRCRRTDGKKWRCSKNTLPGHKYCERHVNRGRNRSRKPVETSDVNSDSITKPCNKLPTTIVSNTESAVSIPTPGPKVINFGNMVSVVSDNRSSLDLSKKDNGIKSCVGYSISVISSGKGSVTYDGTNCISAGAGIGFSPRSVLQVSGCNSSHCTYGNSIDLEPGRCRRTDGKKWRCKSAVLPGHKYCTSHVHRGSKRRSTDREPPTTTPTPTPQSANTNSANTNSPPVYSVAEMTITTEDREAVCKIPNTSLSMSIPASAPLTHNNGKSPNSSSDTDTTISDTINECSYASF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181320g00015 462 Pfam WRC 332 371 IPR014977 -
Stsc181320g00015 462 Pfam WRC 168 210 IPR014977 -
Stsc181320g00015 462 MobiDBLite consensus disorder prediction 1 32 - -
Stsc181320g00015 462 ProSiteProfiles WRC domain profile. 167 211 IPR014977 -
Stsc181320g00015 462 PANTHER GROWTH-REGULATING FACTOR 5 320 442 IPR031137 GO:0005634|GO:0006351|GO:0032502
Stsc181320g00015 462 MobiDBLite consensus disorder prediction 64 80 - -
Stsc181320g00015 462 MobiDBLite consensus disorder prediction 48 85 - -
Stsc181320g00015 462 ProSiteProfiles WRC domain profile. 330 377 IPR014977 -
Stsc181320g00015 462 MobiDBLite consensus disorder prediction 357 397 - -
Stsc181320g00015 462 MobiDBLite consensus disorder prediction 426 451 - -
Stsc181320g00015 462 MobiDBLite consensus disorder prediction 382 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181320g00015 Stsc-Chr181320 99569 102751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181320g00015 317 367 GRF Transcription Factor Family AT4G37740 51.923 8.67e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181320g00015 - - ahf:112753949 611.298