Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181320g00010 ATGCCGACTTCTTCTTCATCTTCTCCTCCTCCTCCTCATCATCATTTTAAATATGACATCTTCATTAGTTTCAGAGGTTCAGATACTCGCCGCGGTTTTCTCAGCCATTTGCTTACCGCATTAAGTCAGAACAAGATTGATGCATACGTGGATTACAAGCTTAAAGAAGGAAATGAGATATTGCCAGCACTTTTTACAGCAATTGAAGAATCACAAATTGCATTAATCATATTCTCAGACGACTATGCCTCTTCGAAATGGTGTTTGAAAGAGCTTGTCAAAATAACCGAATGCCAAAAAGAAAAGGGACAAATCGTCATACCTATTTTTTACAATGTTGAACCTTCACAAGTGCGACATCAAAAGAGGTCCTATGCAGAAGCTTTCATTGAATATGAAAATAACTCAAAGGACGATGCAGATAAATGGAGAACTTCATTGAAAGGAGTTGCCAATTTATCTGGATTTCATTCCAAAAACTTTGGAAGTGAGGCTTTGCTCATTAAAAATGTTGTCAAACGTATCTTGGAAACTTTAGATGATTTGCAACCAACTGATGTTCTTCAAGGCCTCGTTGGAATTGATAAACCACTTAAAGATCTTAAGTCACTAGTTCTTGCCAATGGATCAAAGGATGTTCGTGTGATAGGGATTTGGGGCATGGGCGGGATAGGTAAGACAACTATTGCTAATGCATTATTTCTCTCACTCCGTTCAGAATATGAAAGTGGTTGTATTTTAGCAAATGTCAGAGAACAAATAGAAAAATATGGAATGCTTGAATTGCGAAATAAACTTCATTGCATATTACTTGAGGATAAAGATCTCGACCCTGGTGTTCCGAATGTAGCATTAGCTCATGTTTTGAGGAGACTTCGTCGCAAAAAGATTCTTGTTGTTCTTGATGATGTTATTAATCCAGATCAAGTCAGAGAATTAGTTGGGGGTCGTGGTCAATATGGTTGGTTGGGTCTTGGCAGTAGAATCATTGTCACAACCAGAGATAAGCATGTCCTTCGCAAAGAAGCTGATGATATATATGAAGTGAAGGCTTTAGGATTTGATGAAGCTCTGCAACTTTTAACTTTGCATGCCTTTAATGGAAAGAGCATCCAAATGGGTTACCATTGTCTTATGGTGGAAGTGGCTAAATATGCTAAAGGTGTTCCATTAGCTTTAAAAGTCTTGGGTTCTTTTCTTTATGGCAAAAGTGTTGAAGAATGGAGGAGTCAGTTGGATAAGCTTCAAAAGATGCCATTTGAAGGAATTCAAAAAGTTTTGAGATTGAGCTATGATGGATTAGATCGCCATGAACAAAAGATACTTCTATATATTGTCTGTTTCTTTCAATGTGGAGCTGTATTACATGGTTTAGAAGATGCAAAGATGTTACTGGATGCATGTGGCTTCTCACCTACTATTGCTTTGAGAACCCTCGAAGATAGAAGTCTCATAACTAGAGACTTCAGCAGGGGAGTATATGAAGTACATGACTTGATCCAACAAATGTGCCAAGAGATTGTTTGTGAAGCAAAAATTGGAAAACCAGGGGAAAGGCATCATCTGTGGGATCCTAATGACATTTATCATGTATTGAAGTATGACAAGGGAACTGAGTCTATTGAAAGCATAAGCTTGGATATATCAAAGATAAATGACCTGAACTTGAGTCCTTATTCCTTATTCCTTTTGCATTGGGACTTTTACCCTTTTAAGTATTTGCAACCAGCAGGACTGGAGAATCTTGTTCAACTTCGTATGGAGTGGAGTCGTCTTGAAAAACTTTGGGATGGTACACAGAACCTACCAAGTCTGAGAAAAGTAAACCTTTCTCATTCCAAACAATTGAGGGAAGTTCCAGACTTGTCCAAAGCCTTACGTCTAGAAGAATTAAATCTTGAGTCATGTGAGAATTTGGTCTCTGTTCATACATCAGTTTTCTCTCTCCCAAAGCTTGTTAAACTGTACATGAGAAATTGTAAAAGGCTCAAGAGACTTCCAGGAGTATTGTGTGAAGAAGCATCAGCATCTGCATCTCCTCCATCTGCATTGTCCTCATCCCCCAATCTTCGATACTTGGATCTGACAGGATGTGTGAGTCTGAAGCATCTTCCAGACACCTTTTATAAGCTCACATCTCTTAAACGGCTTGACCTTAGTTGGTGCAAAGAGTTGGACACATCAAACCTACACATCTTATTTGATGGTTTATCTTCTTTGAGATGGCTAGCAATGGATGGGTGTCATAAGTTGCATGAAGTTCCAGATAACATAATCAACTTATCATTGTTAGAGTGGTTATCACTTGATGACACTAACGTGAAGAACATGCCAGAAAGCATCAAACATCTTCCACACCTGAATCGTCTCTGTTACGATGGGCCATTAGTTAAGCCCATTAGAATGAGTTAG 2412 0.3856 MPTSSSSSPPPPHHHFKYDIFISFRGSDTRRGFLSHLLTALSQNKIDAYVDYKLKEGNEILPALFTAIEESQIALIIFSDDYASSKWCLKELVKITECQKEKGQIVIPIFYNVEPSQVRHQKRSYAEAFIEYENNSKDDADKWRTSLKGVANLSGFHSKNFGSEALLIKNVVKRILETLDDLQPTDVLQGLVGIDKPLKDLKSLVLANGSKDVRVIGIWGMGGIGKTTIANALFLSLRSEYESGCILANVREQIEKYGMLELRNKLHCILLEDKDLDPGVPNVALAHVLRRLRRKKILVVLDDVINPDQVRELVGGRGQYGWLGLGSRIIVTTRDKHVLRKEADDIYEVKALGFDEALQLLTLHAFNGKSIQMGYHCLMVEVAKYAKGVPLALKVLGSFLYGKSVEEWRSQLDKLQKMPFEGIQKVLRLSYDGLDRHEQKILLYIVCFFQCGAVLHGLEDAKMLLDACGFSPTIALRTLEDRSLITRDFSRGVYEVHDLIQQMCQEIVCEAKIGKPGERHHLWDPNDIYHVLKYDKGTESIESISLDISKINDLNLSPYSLFLLHWDFYPFKYLQPAGLENLVQLRMEWSRLEKLWDGTQNLPSLRKVNLSHSKQLREVPDLSKALRLEELNLESCENLVSVHTSVFSLPKLVKLYMRNCKRLKRLPGVLCEEASASASPPSALSSSPNLRYLDLTGCVSLKHLPDTFYKLTSLKRLDLSWCKELDTSNLHILFDGLSSLRWLAMDGCHKLHEVPDNIINLSLLEWLSLDDTNVKNMPESIKHLPHLNRLCYDGPLVKPIRMS 803
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc181320g00010 803 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 181 - -
Stsc181320g00010 803 Gene3D Ribonuclease Inhibitor 537 674 IPR032675 -
Stsc181320g00010 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Stsc181320g00010 803 Pfam TIR domain 17 193 IPR000157 GO:0007165
Stsc181320g00010 803 Gene3D Ribonuclease Inhibitor 675 798 IPR032675 -
Stsc181320g00010 803 Gene3D - 13 184 IPR035897 -
Stsc181320g00010 803 SMART till_3 17 153 IPR000157 GO:0007165
Stsc181320g00010 803 Gene3D - 185 348 IPR027417 -
Stsc181320g00010 803 PRINTS Disease resistance protein signature 291 305 - -
Stsc181320g00010 803 PRINTS Disease resistance protein signature 386 400 - -
Stsc181320g00010 803 PRINTS Disease resistance protein signature 709 725 - -
Stsc181320g00010 803 PRINTS Disease resistance protein signature 215 230 - -
Stsc181320g00010 803 Pfam NB-ARC domain 206 434 IPR002182 GO:0043531
Stsc181320g00010 803 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 706 IPR044974 GO:0006952
Stsc181320g00010 803 ProSiteProfiles TIR domain profile. 16 179 IPR000157 GO:0007165
Stsc181320g00010 803 SUPERFAMILY L domain-like 496 792 - -
Stsc181320g00010 803 Gene3D - 352 435 IPR042197 -
Stsc181320g00010 803 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 156 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc181320g00010 Stsc-Chr181320 73284 76920 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181320g00010 18 792 WRKY Transcription Factor Family AT4G12020 29.540 1.31e-86 299
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181320g00010 - - ahf:112730190 822.002