Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181320g00009 ATGGAAGTTTTATACACCATGTTGACTTTCATACCCTTTTCTTTCCTATGTCTATTCTTAGGCTTATGTTTCATGATATTAAAGGGAAAATCCATAGGTAACTCAAACTATGCACCATGTAAAGGCACCGTGTTTAACCAACTCCTCCACTTCAAGAACCTCCATGACTACCATACCGAACTGGCCAAGACTAATCCGACTATCCGGCTACTCGCGCCGGATCAAAGCGAATTGTACACTGTCGACCCGAGAAACGTCGAGCACATATTGAAAACAAAGTTTGATAAATACTCAAAAGGGAAATACAATCAAGATATTTTGAGTGATCTTTTTGGCGAAGGGATTTTTAATGTTGATGGTGAGAAGTGGAGGCAACAAAGGAAGCTTGCTAGCTATGAATTTTCCACAAGAGTTCTTAGAGACTTTAGTTGCTCTGTTTTTAGAAAGAATGCTGCTAATTTGGTTAGAGTTTTATCAGAATTTTCTCATCAGGGTCTGGCTTTTGATTTGCAAGATTTATTAATGAGATCCGCTTTGGACTCAATTTGCCAAGTTGGGTTTGGAACAGAATTGAATTGCTTAGAAGAATCAAGCAAAGAAGGAGTTGAGTTTATGAAAGCCTTTGATGAATCAAATGCATTGATCTATTGGCGTTATGTTGATCCATTTTGGAAGATCAAGAGGTTCCTCAACATTGGTAGTGAAGCTACCCTTAAGAAAAATGTTAAATTAATGGATGATTTTGTCCATGGAGTAATTAAGGCCAGAAAAGCACAATTAGCAGTTCAACAAGAAGAGTCTTCTAATAATGTTAAAGAGGACATACTGTCAAGGTTTTTGATGGAGAGCAAGAAAGACCCAGAAACAATGACAGATAAGTATTTGAGAGATATAATAATGAACTTTATGTTAGCTGGAAAAGACTCAAGTGCAAACACTCTCACATGGTTCTTCTACATGCTCTGCAAGAACCCTCTCATTCAGGAAAAGATTGCACAAGAAATCAGAGATAATGTCACTTATTGTTATTGTAGCAGCCATGAAGGAGAAGAAGATCATCAACAACCACAAAACATTGATGAGTTTGTGTCCAATTTAACAGATGATACCATTGATAAAATGCATTATCTTCATGCTGCATTGACAGAGACCTTGAGACTCTACCCTGCTGTTCCTCTGGATGGGAGAACAGCAGAAGAAGAAGACACTCTTCCAGATGGATACAAAGTGAAGAAGGGAGATGGAGTTTACTATTTAACATATGCCATGGCAAGAATCACTTCTGTTTGGGGTGAAGATGCTGAGGAATTCAAGCCTCAAAGATGGCTCAATCATCATGGACTTTTTCAACCTCAATCTCCATTCAAATTTGTAGCTTTCCATGGTGGACCACGTATATGCTTAGGGAAGGAATTTTCTTACAGACAGATGAAAATAGTGACAATGGCTCTTCTATTCTTCTTCAGGTTTAAACTGGCAAATGAAGCTCAAAGTGTTACTTATAGGGTTATGTTTACTCTTCAAATGGATAAGGGTCTCCCTCTCTATGCACTTCCAAGGTCATTAAAGTAA 1572 0.3798 MEVLYTMLTFIPFSFLCLFLGLCFMILKGKSIGNSNYAPCKGTVFNQLLHFKNLHDYHTELAKTNPTIRLLAPDQSELYTVDPRNVEHILKTKFDKYSKGKYNQDILSDLFGEGIFNVDGEKWRQQRKLASYEFSTRVLRDFSCSVFRKNAANLVRVLSEFSHQGLAFDLQDLLMRSALDSICQVGFGTELNCLEESSKEGVEFMKAFDESNALIYWRYVDPFWKIKRFLNIGSEATLKKNVKLMDDFVHGVIKARKAQLAVQQEESSNNVKEDILSRFLMESKKDPETMTDKYLRDIIMNFMLAGKDSSANTLTWFFYMLCKNPLIQEKIAQEIRDNVTYCYCSSHEGEEDHQQPQNIDEFVSNLTDDTIDKMHYLHAALTETLRLYPAVPLDGRTAEEEDTLPDGYKVKKGDGVYYLTYAMARITSVWGEDAEEFKPQRWLNHHGLFQPQSPFKFVAFHGGPRICLGKEFSYRQMKIVTMALLFFFRFKLANEAQSVTYRVMFTLQMDKGLPLYALPRSLK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181320g00009 523 CDD CYP86A 66 513 - -
Stsc181320g00009 523 Pfam Cytochrome P450 48 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PANTHER CYTOCHROME P450 24 513 - -
Stsc181320g00009 523 Gene3D Cytochrome P450 39 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Stsc181320g00009 523 SUPERFAMILY Cytochrome P450 48 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00009 523 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181320g00009 Stsc-Chr181320 60691 64296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181320g00009 1 521 Cytochrome P450 AT2G45510 58.397 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181320g00009 - - gmx:100792128 806.208