Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181320g00008 ATGCTTTCAAGATTCATGGTAGAGAGTGAGAAGGAAGCTGATAATGATGATGACAATATGAGTAATGAGTATTTGAGGGACATAATTCTGAACTTTATGATTGCTGGGAAAGACTCAAGTGCTAACACTTTGTCTTGGTTCTTCTATATGATGTGCAAGAACCCTCATATTCAAGAAAAGATTGCACAGGAAGTCATGGATACTTGCAACAACAACAACAACATAGATGAATTTGTGAATAACATAAGTGATGCTACACTTGAGAGAATGCATTATCTTCATGCAGCTTTGACAGAAACTTTGAGGCTTTATCCTGCACTACCTGTGAATGGGAGAACAGCAGAAGAAAGTGACATACTTCCAGATGGGTATAGATTGAAGAAAGGAGATTCAGTTTACTATTTGGCATATGCTATGGGAAGGATGCCTTACATTTGGGGACAAGATGCTGAAGAATTCAAGCCTGAAAGATGGCTCAATCAACATGGAATTTTTGAACCTCAATCTTCATTCAAATTCATAGCTTTTCATGGTGGTCCTCGGATATGCCTAGGAAAGGAGTTTGCTTATAGACAGATGAAGATCATAGCAATGGCTCTTCTTCGGTTCTTTAGGTTTAAGATGGGAACTGAAGTGAATAATGTGAGATATAGAGTGATGTTCACAATTCACATTGATCAAGGCCTCCCTCTTTATGCAATTCAAAGGTAG 711 0.3812 MLSRFMVESEKEADNDDDNMSNEYLRDIILNFMIAGKDSSANTLSWFFYMMCKNPHIQEKIAQEVMDTCNNNNNIDEFVNNISDATLERMHYLHAALTETLRLYPALPVNGRTAEESDILPDGYRLKKGDSVYYLAYAMGRMPYIWGQDAEEFKPERWLNQHGIFEPQSSFKFIAFHGGPRICLGKEFAYRQMKIIAMALLRFFRFKMGTEVNNVRYRVMFTIHIDQGLPLYAIQR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181320g00008 236 SUPERFAMILY Cytochrome P450 14 236 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 176 185 IPR017972 GO:0005506|GO:0016705
Stsc181320g00008 236 Pfam Cytochrome P450 5 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PRINTS P450 superfamily signature 95 106 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PRINTS P450 superfamily signature 183 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PRINTS P450 superfamily signature 174 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PRINTS P450 superfamily signature 35 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 Gene3D Cytochrome P450 1 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PRINTS E-class P450 group I signature 44 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PRINTS E-class P450 group I signature 183 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PRINTS E-class P450 group I signature 94 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PRINTS E-class P450 group I signature 173 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PRINTS E-class P450 group I signature 24 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00008 236 PANTHER CYTOCHROME P450 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181320g00008 Stsc-Chr181320 49595 51397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181320g00008 1 236 Cytochrome P450 AT2G45510 63.598 2.56e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181320g00008 - - qsa:O6P43_027122 355.91