Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181320g00007 ATGGATTTTCTTCATAACCCTTATGTCTTTGCATCTCTTTCTGCAGGTTTAGTTCTTCTATTGGCACAATTTCTGTTCAGAAAACTAAACAAAAGGGGTAGAAAGAAGAAGAAGTACCATCCAATTGGTGGCACAGTGTTCAACCAATTGATGAACTTCAATAGGCTGCACCATTACATGACTGATCTTGCAGGGAAGTATAAGACTTACAGATTGCTGAGTCCATTCAGGAATGAGGTTTACACTTCTGATCCTATCAATGTTGAGTATATCCTCAAAACCCATTTTGAAAATTATGGAAAGGGATTGTACAACTACCAAAATTTAAGGGATTTCCTGGGTGATGGGATCTTCACCGTCGATGGCGAGAAATGGCGTGACCAGAGGAAGATATCAAGCCATGAATTCTCCACCAAGATGTTAAGAGATTTCAGCATTTTTGTATTCAGAAAGAATGCAGCAAAAGTTGCAAATGTAGTGTCTGAAGCTGCAACTTCTAACAAGACATTGGAAATCCAAGACCTTTTGATGAAATCAACTTTGGATTCAATATTCCAAGTTGCATTTGGAACTGAACTTGACAGCATGTGTGGATCAAGCGAGGAAGGGAAGAACTTCGCTGACGCTTTTGAAATTGCAAGTATGCTTACTCTTTACCGGTACGTCGATGTCTTCTGGAAGATAAAGAAATTTCTGAATGTTGGATCAGAGGCAGTCTTAAGAAAGAATACCAAAATCTTAAATGACTTTGTCTTTAAGCTAATTAACACAAGAATTCAGCAATTGCAGATTTCAAAGGATGATTCTTCTAACAAACATGGTGACATACTCTCAAGGTTTCTGCAAGAGGAGAAATATGATTCAACATACTTAAGAGACATAATTCTAAACTTCGTTATAGCCGGAAAAGACACAACAGCTGCGACACTTGCATGGTTTATTTACATGCTGTGTAAGTATCCTGAAGTGCAAGAAAAAGCTGCAGAAGAAGTGAAAGAAGCAACAAACACAAAAACAAAGACATTTAGCAGTGGTGCTGAGTTTGTATCTTTTATAACTGATGAAGCACTTGAAAAGATGAATTATCTCCATGCAGCAATCACTGAAACTCTCAGACTTTACCCTGCAGTTCCAGTGGATGCAAAGATTTGCTTTGGTGATGATACATTACCAGATGGATACGATGTAAATAAAGGAGATATGGTATCTTATCAACCTTATGCAATGGGGAGGATGAAATTCATATGGGGTGATGATGCTGAAGAATTTAGACCAGAAAGATGGCTTGATCATAATGGCATTTTTCAGCCAGATAGTCCTTTCAAATTTACAGCTTTCCAGGCAGGTCCTCGGATTTGTCTCGGAAAGGAGTTTGCATACAGACAGATGAAGATATTCTCAGCAGTTTTGTTAGGTTGTTTCCGGTTTGAATTGAATGATGAAATGAAAGTTGTCACTTACAAGACAATGATAAATCTTCACATTGATGGAGGTCTTGAAGTCAAAGCCTTCCACAGGCATTGGCATTAA 1530 0.381 MDFLHNPYVFASLSAGLVLLLAQFLFRKLNKRGRKKKKYHPIGGTVFNQLMNFNRLHHYMTDLAGKYKTYRLLSPFRNEVYTSDPINVEYILKTHFENYGKGLYNYQNLRDFLGDGIFTVDGEKWRDQRKISSHEFSTKMLRDFSIFVFRKNAAKVANVVSEAATSNKTLEIQDLLMKSTLDSIFQVAFGTELDSMCGSSEEGKNFADAFEIASMLTLYRYVDVFWKIKKFLNVGSEAVLRKNTKILNDFVFKLINTRIQQLQISKDDSSNKHGDILSRFLQEEKYDSTYLRDIILNFVIAGKDTTAATLAWFIYMLCKYPEVQEKAAEEVKEATNTKTKTFSSGAEFVSFITDEALEKMNYLHAAITETLRLYPAVPVDAKICFGDDTLPDGYDVNKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWLDHNGIFQPDSPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFELNDEMKVVTYKTMINLHIDGGLEVKAFHRHWH 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181320g00007 509 CDD CYP86A 68 499 - -
Stsc181320g00007 509 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 Pfam Cytochrome P450 41 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 Gene3D Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00007 509 PANTHER CYTOCHROME P450 26 500 - -
Stsc181320g00007 509 SUPERFAMILY Cytochrome P450 38 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181320g00007 Stsc-Chr181320 45455 48410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181320g00007 1 506 Cytochrome P450 AT2G45510 51.953 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181320g00007 - - gmx:100789049 806.594