Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181320g00001 ATGGATTACAACCTTACACTATTACTATTCATCATCTTATCCTTTCTTGTCTCAACATTTCTTTTCTCCTTCATCATCCAAAAACAACATTCAAAGCATCTTCCACCAGGTCCTAAACCATACCCCATCATTGGAAACCTCTTACATCTTCTTCTTACCAACAAAAACAATTCTAATTCCCTTCAATCATTCATCAACCTCTCCAAAACTTATGGACCTATAATTACCCTAAAATTAGGAACTCTTACCTCCATAGTGATTTCTTCTCCACAAATAGCCAAAGAAGCACTCCAAAAAAATGATGTGGCCTTATCCAATAGAACAATCCCTTATACTTTTTCTTCATCAATTGAGGAGCATATGAACAACTCAATTGTCTTCTTACCTTCATCAACCAAATGGAAACTATTCAGAAGAGCTTGTGCAACAAGAATATTCTCGCCTCAACGACTTGACGCCACACAAATCCAAAGGAAGAGAAAGGTTCAAGACTTGTTAGAATTTTTGCATGAATGTTGCAAAAAAGGTGAAGCTTTAGATATTGGTGAGGCTATTTTTAAAACGGTACTAAATTCAATATCAAACACTTTTATTTCCATGGATTTGGTTGATTACTATGATAATGAGAAGTTTAAAGTGTTTAAGGATATAGTGTTTGGCTTGACTGAAGAATCTACAAGGCCTTGTTTGGGAGATTTTTTTCCTTTGTTAGGATTTTTGAATTCACGTGGTGCACGTGCAAGGACAAAAGATCGCAATGACAAGTTGTACGCAGTTATTGATGGTGCCATGGAAAAAAGAATTCGTTTGAGGGACTCAAAAGGTGATTACTCTGGAGAGATCAATGATGCATTGGATTCCCTTTTGGATCTTGTCAATGAAGAGGGTTCTGAATTCAATCGCCATTATGTTGTTCATTTGTTGATGGATTTATTTGTTGCTTCTATAGACACAACATCAAGCACATTAGAATGGGCGATGGCAGAGTTGATGCGTAGTCCAACAAAATTGCACAAAGTTAGAGAGGAGCTTCAACAAATACTAGGGGAAAATGGAGAAGTTGAAGAGTCTCGTATCTCTAAGCTCCCATATCTTAATGCAACTGTGAAAGAAACTTTGAGGCTTCATCCACCAACACCATTGCTCGTACCCCGCAAAGCAAATGATGATGTACAGTTAGGTGGCTTCACTGTGCCCAAAAATGCACAAATCCTTTTTAATGTGTGGTCTATTGGAAGAGACTCACACATTTGGGCTAACCCTAATTCATTTGAACCTGAGAGGTTCTTGGATAGTGAAATTGATTTTAAGGGTAAACATTTTGAGTTGATTCCATTTGGTTCAGGAAGAAGAATTTGCCCTGGATTACCATTGGCTTCAAGGACTTTGAGTTTTATGTTGGCATCACTTTTGTATCATTTTAATTGGAAGCTTTATAATGAAATGAAACCAGAAGATACAGATATGAGTTTTAGTTATGGCCTTACCTTACATAAGGCCCAACCTCTACTTCTGGTACCTGTTAAAGTCTAG 1533 0.3712 MDYNLTLLLFIILSFLVSTFLFSFIIQKQHSKHLPPGPKPYPIIGNLLHLLLTNKNNSNSLQSFINLSKTYGPIITLKLGTLTSIVISSPQIAKEALQKNDVALSNRTIPYTFSSSIEEHMNNSIVFLPSSTKWKLFRRACATRIFSPQRLDATQIQRKRKVQDLLEFLHECCKKGEALDIGEAIFKTVLNSISNTFISMDLVDYYDNEKFKVFKDIVFGLTEESTRPCLGDFFPLLGFLNSRGARARTKDRNDKLYAVIDGAMEKRIRLRDSKGDYSGEINDALDSLLDLVNEEGSEFNRHYVVHLLMDLFVASIDTTSSTLEWAMAELMRSPTKLHKVREELQQILGENGEVEESRISKLPYLNATVKETLRLHPPTPLLVPRKANDDVQLGGFTVPKNAQILFNVWSIGRDSHIWANPNSFEPERFLDSEIDFKGKHFELIPFGSGRRICPGLPLASRTLSFMLASLLYHFNWKLYNEMKPEDTDMSFSYGLTLHKAQPLLLVPVKV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181320g00001 510 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 Gene3D Cytochrome P450 23 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 509 - -
Stsc181320g00001 510 Coils Coil 337 357 - -
Stsc181320g00001 510 CDD CYP76-like 68 507 - -
Stsc181320g00001 510 FunFam Cytochrome P450 76C4 26 506 - -
Stsc181320g00001 510 Pfam Cytochrome P450 35 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181320g00001 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181320g00001 Stsc-Chr181320 105 7898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181320g00001 1 509 Cytochrome P450 AT2G45550 46.512 5.35e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181320g00001 - K20556 gmx:100809483 550.436