Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181315g00013 ATGGAGTCAATAGGCAGAAATAATGGAGAAGTAGTTGTGGCGGTGATCATGTTTGTTTCAGTTTTTGTAGCGTGTTATTGCGACGGAAGTGTAACCGTTGCAAAAGATGGGAGTGGAGATTACACAAGTGTGAGTGAAGCAATTAAGAATGCTCCAAGGTTGAGTGAGAATGTTTACACCATTCATGTTCGAGAAGGTACTTATGAAGAGTATGTTGTTATTCATCATGACAAGACCAATATTAAGCTTGTTGGAGATGGTCCTCGCCATACCAAAATTGTTGGTTACCAAGGTTCCACCATAGATATTCATGGAGAAGGATTCATGGCGGAAAGCATGGCATTTGTGAACTCAGCAGGTCTAAAAGCAAGCGCTGCAGTTGCTGTTCGCAACGAAGCAAACAACACCATCTTCTACCGATGTTCCATAGAGGGTTACCAGGACACCCTCTGGGCAGTTTCCGGCAGGCAGTTCTACAAGAACTGCGACATCTACGGCACCGTCGACTTCATCTACGGCGCCGCCGCCGCCCTCTTCCAAGACTGCATGATATACGCAAGATACCGCGAATACGTCACATTCACCGCCCAGTCACGAGACAATCCAAACGACAACTCCGCCTTCACTTTCCAGCGTTGCAACTTCACCATGTCTCCAGAAGATTCCAATTCTCATGCTAACTCTGCGGTGCACGCCACGTTGGGCCGCCCGTGGAGGCCGTACTCCACGGTGGCTATACTGCAGTGTTTTATTGACTCTATTGTGGAGCCCGCGGGCTGGGAAGAGATGCCCGGGCAGCCCACTGATAAGGTTACTTATGTGGAGTATGGGAACGTTGGGCCTGGGGCCCGTACGGATGGGAGAGTGAAGTGGCCTGGTGTTAGAGTCCTTCGCCGACCTGCTGAAGCTGCACGCTTCACTGCTTCTCATCTCTTGGATGCTGATTCTTGGATTCCCTCCACTGGCGTTCCTTATGACAATGGATTCTAG 990 0.497 MESIGRNNGEVVVAVIMFVSVFVACYCDGSVTVAKDGSGDYTSVSEAIKNAPRLSENVYTIHVREGTYEEYVVIHHDKTNIKLVGDGPRHTKIVGYQGSTIDIHGEGFMAESMAFVNSAGLKASAAVAVRNEANNTIFYRCSIEGYQDTLWAVSGRQFYKNCDIYGTVDFIYGAAAALFQDCMIYARYREYVTFTAQSRDNPNDNSAFTFQRCNFTMSPEDSNSHANSAVHATLGRPWRPYSTVAILQCFIDSIVEPAGWEEMPGQPTDKVTYVEYGNVGPGARTDGRVKWPGVRVLRRPAEAARFTASHLLDADSWIPSTGVPYDNGF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181315g00013 329 FunFam Pectinesterase 4 27 329 - -
Stsc181315g00013 329 SUPERFAMILY Pectin lyase-like 29 327 IPR011050 -
Stsc181315g00013 329 PANTHER PECTINESTERASE 31 319 - -
Stsc181315g00013 329 Pfam Pectinesterase 31 314 IPR000070 GO:0030599|GO:0042545
Stsc181315g00013 329 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Stsc181315g00013 329 Gene3D - 28 329 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181315g00013 Stsc-Chr181315 81594 85953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181315g00013 31 329 Carbohydrate Esterase AT1G11590 42.492 4.38e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181315g00013 K01051 - gmx:102665195 441.425