Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181312g00010 ATGAACGACCAGCTCTCCAAGCAAACCTCGATCTTCGGTCTCCGACTCTGTGTGGTCGGCGGCATCTGCGTGGGCGCCGCCATCGTCCTCATCCTGGTCCTCATCTCCCTCTGGCTCGCCTCCAAGCTCTCCACCACCAACAAAAGAAACCGCCACACCATTCCCGACGTCCCCAAAGAAATTCAAGAAATCGAGATAGACCGCCATCCGTCTTCTTCTCCCTCCTCTGCTTCCAAGCCCGTTCCCGGGAACGGGCATGGGCTCCAGCCCGAGTCCGAGCCTGACCGCCTCCCTCCGCCAACTGAAGGAGAAGAAAGCAACAACAACAACGCGGTTTTGGGGATTAAGAGGATTCAGTTTGAGATTGGGAAGAACCACAGAATATCGTACCCGGAACAACGCGCTTTGGTGACGTCATCTTCACAGTCGAATAAGGGAAGCGGAGGAGAGGCCTTGGAACATAATAATCAGCAAGGTGCTACGGTGATCCCTGAGGTTTCACATTTGGGTTGGGGACACTGGTACACCCTCAGGGAGCTTGAACTTGCCACCAACTTCTTCGCCAACGAGAACGTTATCGGCGAAGGTGGCTACGGGATTGTTTACCACGGCATCTTCAACGACAACACTCATGTCGCCATCAAGAATTTGCTCAATAATAAGGGTCAAGCTGAGAAAGAGTTCAAGGTTGAAGTGGAAGCTATAGGGCGAGTTCGCCATAAGAATCTCGTGCGGTTGCTTGGTTATTGTGCTGAAGGTGCTCATAGAATGCTTGTATATGAGTACGTTGATAATGGAAACTTGGAGCAATGGCTACATGGGGATGTTGGGCCACTTAGTCCTCTCACTTGGGAAATTAGAATGAACATAATTCTGGGAACTGCAAAAGGCTTGGCTTATCTCCATGAGGGGTTGGAACCCAAAGTTGTTCATCGCGATATTAAATCGAGCAACATTTTGATTGACAAGCAATGGAATTCAAAGGTGTCCGACTTTGGACTTGCTAAACTCCTTGACTCTGATAGCAACTACATTAAAACTCGTGTAATGGGTACATTCGGATATGTGGCTCCTGAATATGCAAGTACCGGCATGTTGAATGAACAAAGCGATGTGTATAGTTTTGGAATTCTTATAATGGAAGTAATTACAGGTCGGAATCCAGTTGATTATAGTCGGCCACCGGAGGAGGTGAATTTAGTTGACTGGCTAAAGAAGATGGTTAGTAACAGAAATGCAGAGGGAGTGTTGGATCCGAAACTCCCTGAGAAACCGAATACAAGGGCACTAAAAAGAGCACTTATTGTAGCATTGCGCTGCACAGACTCAAATGCACAAAAGCGGCCTAAAATGGGACGCATTGTACACATGCTTGAAGATGAAGAATCCCCTTACAAAGAGGTTAGAGCTTTTCTGCTCTGA 1422 0.4803 MNDQLSKQTSIFGLRLCVVGGICVGAAIVLILVLISLWLASKLSTTNKRNRHTIPDVPKEIQEIEIDRHPSSSPSSASKPVPGNGHGLQPESEPDRLPPPTEGEESNNNNAVLGIKRIQFEIGKNHRISYPEQRALVTSSSQSNKGSGGEALEHNNQQGATVIPEVSHLGWGHWYTLRELELATNFFANENVIGEGGYGIVYHGIFNDNTHVAIKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPLSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLDSDSNYIKTRVMGTFGYVAPEYASTGMLNEQSDVYSFGILIMEVITGRNPVDYSRPPEEVNLVDWLKKMVSNRNAEGVLDPKLPEKPNTRALKRALIVALRCTDSNAQKRPKMGRIVHMLEDEESPYKEVRAFLL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181312g00010 473 FunFam Probable serine/threonine-protein kinase At1g01540 167 262 - -
Stsc181312g00010 473 Pfam Protein kinase domain 189 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181312g00010 473 PANTHER OS01G0323000 PROTEIN 1 466 - -
Stsc181312g00010 473 CDD STKc_IRAK 193 459 - -
Stsc181312g00010 473 MobiDBLite consensus disorder prediction 52 67 - -
Stsc181312g00010 473 SUPERFAMILY Protein kinase-like (PK-like) 164 459 IPR011009 -
Stsc181312g00010 473 ProSitePatterns Protein kinases ATP-binding region signature. 193 215 IPR017441 GO:0005524
Stsc181312g00010 473 Gene3D Transferase(Phosphotransferase) domain 1 263 470 - -
Stsc181312g00010 473 ProSiteProfiles Protein kinase domain profile. 187 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181312g00010 473 Gene3D Phosphorylase Kinase; domain 1 152 262 - -
Stsc181312g00010 473 MobiDBLite consensus disorder prediction 49 110 - -
Stsc181312g00010 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Stsc181312g00010 473 SMART serkin_6 187 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181312g00010 473 FunFam Putative receptor-like serine/threonine-protein kinase 263 471 - -
Stsc181312g00010 473 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181312g00010 Stsc-Chr181312 42260 45445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181312g00010 113 461 Trihelix Transcription Factor Family AT1G70460 41.828 9.46e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Stsc181312g00010 Pkinase 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181312g00010 - - gmx:100797440 680.633