Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181311g00024 ATGAAAGAAGATAATTTGCAGCGGCGATGGTCCCTCAAAGACTTTGAGATCGGAAAACCTCTTGGTAGAGGAAAGTTCGGCAGAGTCTACGTCGCCAGAGAAGTCAAGAGCAAATATGTAGTTGCATTGAAGATTATATTCAAGGAACAAATTGAGAAGTACAGACTTAATCATCAACTAGGGAGGGAGATGGAAATACAATCCAACCTTCAACACCCGAACATTCTACGACTATATGGGTGGTTTCATGATGCAGAGCGTGTTTTCTTGATTCTTGAATATGCTCACAATGGTGAGCTCTACAAGGAGCTTAGAAAAAGAGGCCACCTTACTGAGATGCAAGCAGCCACGTATATTTTGAGTCTCACAAAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCATAGGGATATCAAACCAGAAAATCTGTTGCTTGACCATGAGGTATTGTTCTCCTTTTACACCTTCTTGGTTCTTAACTTCTTATGCAAACTATGTGGATACTAA 510 0.4039 MKEDNLQRRWSLKDFEIGKPLGRGKFGRVYVAREVKSKYVVALKIIFKEQIEKYRLNHQLGREMEIQSNLQHPNILRLYGWFHDAERVFLILEYAHNGELYKELRKRGHLTEMQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEVLFSFYTFLVLNFLCKLCGY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181311g00024 169 FunFam Aurora kinase A 7 98 - -
Stsc181311g00024 169 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 7 150 IPR030616 GO:0004672
Stsc181311g00024 169 Gene3D Phosphorylase Kinase; domain 1 3 96 - -
Stsc181311g00024 169 Pfam Protein kinase domain 15 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181311g00024 169 SUPERFAMILY Protein kinase-like (PK-like) 8 150 IPR011009 -
Stsc181311g00024 169 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Stsc181311g00024 169 Gene3D Transferase(Phosphotransferase) domain 1 97 166 - -
Stsc181311g00024 169 SMART serkin_6 15 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181311g00024 169 ProSitePatterns Protein kinases ATP-binding region signature. 21 48 IPR017441 GO:0005524
Stsc181311g00024 169 ProSiteProfiles Protein kinase domain profile. 15 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181311g00024 Stsc-Chr181311 138222 143650 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181311g00024 15 147 CBL-interacting serine-threonine protein kinases AT5G35410 40.602 5.67e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Stsc181311g00024 Pkinase 5.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181311g00024 K08850 - gmx:100800111 270.781