Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181311g00006 ATGGCTGGTTGTTCAATAATTGCCTCTGCTTCTATCTTTGTCTTGTTTCTTCTCATTGGATTCTCCTCAGCTAAGGAGCTCTTGGTTGGTGGCAAGATTGATGCTTGGAAGATTACATCCTCTGAAGCTGACTCTCTCAACAAATGGGCTGAAAGGTCTCGCTTCCAAGTTGGGGATCATCTTGTGTGGAAATACGATGGCAAAGAAGACTCAGTCTTGGAAGTGGACAAAGAAGACTATGCTAACTGCAGCACCTCAAACCCAATGAAGGAGTACAATGATGGCACCACTAAGGTGGAGCTTGACCGTCCAGGAGCATTCTACTTCATCAGCGGGGCAGCGGGTCACTGCCAGAAGGGCCAGAAGCTCGTTGTCGTTGTTATGTCTCCGAGGGGAGGAAGAAGGTCCGCTGGTTTCTCTCCAGCGCCTTCTCCGGCACCATCTGCAGAGTTTGAAGGTCCAGCTGTTGCTCCAACTAGTGGCGCCACAGCTTTGAAGAGTGGCCTTGTGATGGCTCTGGGAGTGTTGGCTATGAGTGTGGGTTGTTTTCTGATGTGA 558 0.5 MAGCSIIASASIFVLFLLIGFSSAKELLVGGKIDAWKITSSEADSLNKWAERSRFQVGDHLVWKYDGKEDSVLEVDKEDYANCSTSNPMKEYNDGTTKVELDRPGAFYFISGAAGHCQKGQKLVVVVMSPRGGRRSAGFSPAPSPAPSAEFEGPAVAPTSGATALKSGLVMALGVLAMSVGCFLM 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181311g00006 185 FunFam Early nodulin-like protein 1 24 132 - -
Stsc181311g00006 185 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Stsc181311g00006 185 Gene3D - 23 131 IPR008972 -
Stsc181311g00006 185 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Stsc181311g00006 185 CDD OsENODL1_like 25 128 IPR041846 -
Stsc181311g00006 185 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Stsc181311g00006 185 PANTHER BLUE COPPER PROTEIN 26 146 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181311g00006 Stsc-Chr181311 39447 40309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181311g00006 1 176 Phytocyanin Superfamily AT4G31840 48.876 1.48e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181311g00006 - - ahf:112782998 307.76