Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181310g00014 ATGCAAATGAAAATGGGTTTTGCAGTGTGGGGTTTCTTCTTCATTTTCACCACATTTTTATTCTCTGCTCCTTCCTCTCTTGCTCTCTCCCAAGATGGTTTGGCCTTGTTGGAAATGAAGAGCACATTGAATGACACAAAAAATGTTCTCAGCAACTGGCAAGAGCTTGATGAATCTCCTTGTTCATGGACTGGTATCTCTTGTTATCCTGATGATGCTGAACAAAGAGTTCGCTTCATAAATCTTCCATACATGCAACTTGGAGGAATCATATCTCCCAGCATTGGCAAACTCAGTAGACTCCAGAGATTGGCACTTCATGAGAACAGCTTGCATGGGATTATTCCTTATGAAATCTCTAATTGTACTGAGCTAAGAGCACTGTACTTAAGGGGTAACTATTTCCAAGGTGGCATACCAGCAGCTATTGGAAATCTCTCCTTTCTAAATATACTTGATTTGTCAAGCAACTCATTGAAAGGTGCTATACCTTCCTCTATTGGCCGCCTCTCGCATTTGCAAGTTCTGAACTTGTCCACCAACTTCTTTTCTGGAGAAATCCCTGACATTGGAGTTCTAAGCACCTTTGGGAAGAACTCGTTTATTGGAAATCTAGATCTTTGCGGGCGACAAGTTGAAAAACCTTGCCGAACATCTCTTGGTTTCCCTGTGGTGCTACCCCATGCTGAAAGTGAAGAAGCTGCAGTCCCTCCCAAAAGAACTTCACATTACATTAAGTGGTTGGTAATTGGTGCAATGACAACAATGGGGATTGCACTTGTCATAATCCTATCGTTCCTCTGGGTCCGGTTGCTATCGAAGAAGGAAAGAGCTGCTAGGAGATACACAGAAATGAAGAAACAAGTTGATTCAGAATCAAGTAGGAATGCAGGAGCAAAGCTTATTACCTTCCATGGTGATCTTCCATACGCATCATCTGAAATCATAGAGAAGCTCGAGTCTCTCGATGCAGATGATGTAGTAGGGTCAGGAGGATTCGGGACTGTTTACCGGATGGTGATGAATGATTGTGGTACATTTGCTGTCAAGCGGATCGACAGAACTCGGGAAGGGTGTGATCAAGTGTTTGAGAGGGAACTTGAGATCTTGGGAAGCATCAAGCATATAAATCTTGTAAACCTCCGCGGTTACTGCAGGCTCCCTTCTTCAAGGCTCCTTATATATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAATACTCAGCAACCACTGAATTGGAGTGATCGCTTAAATATAGCCCTTGGTTCTGCCCGGGGCCTGGCGTACTTGCACCATGAGTGTTGTCCTAAAGTTGTACACCGCGACATAAAATCTAGCAACATTCTCCTTGATGAAAACCTGGAGCCTCGTATTTCTGATTTTGGTCTTGCAAGGCTTTTGGTCGATGAAGAGGCTCATGTGACAACAGTGGTTGCCGGCACATTTGGCTATTTGGCACCAGAGTACCTACAAAGTGGTAGAGCCACTGAAAAGTCAGATGTGTATAGCTTTGGAGTTCTATTGCTAGAACTTATAACTGGAAAGAGGCCAACCGATCCTTCCTTCGCAAAGCGAGGTTTAAATGTTGTTGGTTGGATGAACACATTGCTGAGAGAAAACAGATTGGATGATGTGGTAGACAAAAGATGTACAGATGTGGATGCAGGAACTCTTGAGGTGATTCTTGATATAGCAGCAAGATGCACGGATGGAAACGCGGATGAACGTCCATCAATGAATGAGGTGTTACAGTTGCTTGAGCAAGAAGTTATGTCTCCTTGCCCGAGCGAATTCTACGAGTCTCAGTCAGATCGCTGA 1830 0.4377 MQMKMGFAVWGFFFIFTTFLFSAPSSLALSQDGLALLEMKSTLNDTKNVLSNWQELDESPCSWTGISCYPDDAEQRVRFINLPYMQLGGIISPSIGKLSRLQRLALHENSLHGIIPYEISNCTELRALYLRGNYFQGGIPAAIGNLSFLNILDLSSNSLKGAIPSSIGRLSHLQVLNLSTNFFSGEIPDIGVLSTFGKNSFIGNLDLCGRQVEKPCRTSLGFPVVLPHAESEEAAVPPKRTSHYIKWLVIGAMTTMGIALVIILSFLWVRLLSKKERAARRYTEMKKQVDSESSRNAGAKLITFHGDLPYASSEIIEKLESLDADDVVGSGGFGTVYRMVMNDCGTFAVKRIDRTREGCDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYLAMGSLDDLLHENTQQPLNWSDRLNIALGSARGLAYLHHECCPKVVHRDIKSSNILLDENLEPRISDFGLARLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELITGKRPTDPSFAKRGLNVVGWMNTLLRENRLDDVVDKRCTDVDAGTLEVILDIAARCTDGNADERPSMNEVLQLLEQEVMSPCPSEFYESQSDR 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181310g00014 609 SUPERFAMILY Protein kinase-like (PK-like) 307 591 IPR011009 -
Stsc181310g00014 609 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 398 602 - -
Stsc181310g00014 609 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 193 - -
Stsc181310g00014 609 ProSiteProfiles Protein kinase domain profile. 322 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181310g00014 609 SUPERFAMILY L domain-like 29 215 - -
Stsc181310g00014 609 Pfam Protein kinase domain 326 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181310g00014 609 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Stsc181310g00014 609 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Stsc181310g00014 609 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Stsc181310g00014 609 Gene3D Phosphorylase Kinase; domain 1 282 397 - -
Stsc181310g00014 609 SMART serkin_6 322 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181310g00014 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Stsc181310g00014 609 Gene3D Transferase(Phosphotransferase) domain 1 398 600 - -
Stsc181310g00014 609 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 75 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181310g00014 Stsc-Chr181310 84483 88150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181310g00014 13 599 Receptor kinase-like Gene Family AT2G35620 49.746 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Stsc181310g00014 Pkinase 5.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181310g00014 - - gmx:100797653 1016.14