Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181310g00002 ATGTATGGAGACATATCTGCTAAGGCAGCTCATATGCTATCACTCCCTAAGGTTTCGGATTTCTTTGCAAGGCTAATACAGAGAGTTTCTCCCAAGAGCTATCATCAGGCCTGTGCAGAAGTTTATGTGACACAAAAGTTTCTAGAGAATTTCTGCGGTGATCAGGTTCGTTTCTTGGCAAGGTCTTTTGGTGTGCCAGGAAATCATCTTGGGCAGCAAAGTCATGGTTTCCGTTGGCCTTATGGTCCGGTGGCTATTATTACCCCTTTCAATTTTCCATTAGAAATTCCAGTCCTTCAACTGATGGGTGCACTTTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTAAGCATTGTCATGGAGCAAATGTTGCGTCTGCTTCATACATGTGGTTTACCTGTAGAAGACGTAGACTTCATAAATTGTGATGGGAAGACAATGAACAAGCTGTTGCAGGAGGCAAATCCAAGAATGACCCTTTTCACTGGGAGTTCAAGAGTGGCAGAGAAATTGGCTGGCGATCTGAAGGGCCGGATTAAATTGGAAGATGCTGGATTTGATTGGAAAATACTGGGCCCTGATGTTGACCAGGAAGATTACGTTGCATGGGTCTGTGACCAGGATGCTTATGCATGCAGTGGTCAGAAGTGTTCAGCACAATCGTTATTATTTATGCATGAGAACTGGGCTTCTACTTCCTTGGTATCCAAATTGAAGGGTCTTGCTGAGAGAAGAAAGCTAGAGGACTTGACAATTGGTCCAGTTCTCACTTTTACAACCGAATCAATGTTGGATCACATGAAACAATTACTTGAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCAAGCCTTTGGAGGGCCATTCTATTCCCTCTATTTACGGTGCTATTAAGCCCACTGCTATTTATGTTCCCCTTGAGGAAATTGTGAAGGACAAGAATTATGAGCTTGTGACAAAAGAAATTTTTGGACCTTTCCAGATAATTACTGACTACAAAAGCAGTCAACTACCAACCGTGTTGGATACCTTGGAAAAAATGCATGCACATTTAACTGCTGCTGTAGTTTCAAATGATCCTCTCTTTTTACAGGAAGTCATTGGTAGATCAGTGAATGGTACAACTTATGCTGGTCTAAGAGCAAGGACTACTGGAGCTCCACAAAACCATTGGTTTGGACCTTCTGGAGATCCTAGGGGTGCTGGGATCGGAACACCAGAAGCAATAAAACTAGTATGGTCTTGCCACAGAGAAGTTATATATGATTTTGGTCCAGTACCAAACCGTTGGGAAATTCCTCCATCTACATGA 1320 0.4288 MYGDISAKAAHMLSLPKVSDFFARLIQRVSPKSYHQACAEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINCDGKTMNKLLQEANPRMTLFTGSSRVAEKLAGDLKGRIKLEDAGFDWKILGPDVDQEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWASTSLVSKLKGLAERRKLEDLTIGPVLTFTTESMLDHMKQLLEIPGSKLLFGGKPLEGHSIPSIYGAIKPTAIYVPLEEIVKDKNYELVTKEIFGPFQIITDYKSSQLPTVLDTLEKMHAHLTAAVVSNDPLFLQEVIGRSVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTPEAIKLVWSCHREVIYDFGPVPNRWEIPPST 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181310g00002 439 Pfam Aldehyde dehydrogenase family 17 381 IPR015590 GO:0016491
Stsc181310g00002 439 FunFam Aldehyde dehydrogenase 12 196 384 - -
Stsc181310g00002 439 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 213 224 IPR016160 GO:0016491
Stsc181310g00002 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 191 380 IPR016163 GO:0016620
Stsc181310g00002 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 190 IPR016162 GO:0016491
Stsc181310g00002 439 FunFam probable aldehyde dehydrogenase 1 188 - -
Stsc181310g00002 439 SUPERFAMILY ALDH-like 17 406 IPR016161 GO:0016491
Stsc181310g00002 439 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 3 439 IPR044638 GO:0004029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181310g00002 Stsc-Chr181310 9654 14803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181310g00002 1 439 Aldehyde Dehydrogenase Gene Family AT5G62530 84.773 0.0 802