Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181309g00018 ATGGAAGTCATCCCCTCTACAAAGTTTGCAAATTTCTTTGCAAACAAAATGATTATGAAAGCATCTCAAGAGGCAGACATACTTCATATCATTGATTTTGGTATTTTATATGGTTTCCAGTGGCCAATACTAATTAAGTTCCTCAAAGAAAGAGAAAATGGACCCCCCAAGAAGCTGAAGATCACAGGAATAGAGTTTCCCCAACCTGGTTTTCGTCCTGCAGAAAGAATTCAGGAGACTGGTCGTCGTCTTGCTAGCTACTGTGAGCGTTTCGAAATTCCCTTTGAGTATAATGCCATAGCAACAAGGAACTGGGAAACCATCCAGGTTGAAGACCTTAAAATTGAGAGCGATGAGTTTCTTGCTGTGAACTGTCATAAGAGGTTTGAGAATTTGATGGATGAAACACTTGAAGCAAACAGTCCTAGAGATGCAGTATTGCAGTTGATCAGGAAGATAAATCCGGATATTTTTGTTCTGTCCATCGTTAATGGATCTTATAGTGCACCTTTCTTTGCTACAAGATTCAGAGAGGCCTTGTTCCATTTTTCTGCAATGTATGACATGTGTGATGCCGTCATACCCCGTGACGATGAGATGAGGATGAAGATTGAGCGAGAGATTATAGGCCGGGGGGTTATGAATGTTGTGGCATCCGAAGGTTTTGAAAGGATTGATAGGCCTGAGACATACAAGCAATGGCAGACTAGGATTACAAGGGCCGGATTCAAGCAGCTACCATTGAAAGAGGAACTAATGGCCAAATTTTCAGCCAAGTTAAAGGAATGGTACCACAAAGACTTTGTCTTGGATGAAGACAGCAACTGGATGCTTCAAGGTTGGAAGGGCCGCGTTTTATACGCATCCACTTGTTGGGTGCCTGCATAG 888 0.4234 MEVIPSTKFANFFANKMIMKASQEADILHIIDFGILYGFQWPILIKFLKERENGPPKKLKITGIEFPQPGFRPAERIQETGRRLASYCERFEIPFEYNAIATRNWETIQVEDLKIESDEFLAVNCHKRFENLMDETLEANSPRDAVLQLIRKINPDIFVLSIVNGSYSAPFFATRFREALFHFSAMYDMCDAVIPRDDEMRMKIEREIIGRGVMNVVASEGFERIDRPETYKQWQTRITRAGFKQLPLKEELMAKFSAKLKEWYHKDFVLDEDSNWMLQGWKGRVLYASTCWVPA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181309g00018 295 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 288 IPR005202 -
Stsc181309g00018 295 ProSiteProfiles GRAS family profile. 1 293 IPR005202 -
Stsc181309g00018 295 Pfam GRAS domain family 2 292 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181309g00018 Stsc-Chr181309 91041 91928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181309g00018 1 295 GRAS Transcription Factor Family AT1G07530 59.661 9.09e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc181309g00018 GRAS 9.6e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181309g00018 - - pvu:PHAVU_011G063200g 482.256