Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181309g00005 ATGGGAAAGAAGCACTCAGTTTCTTGCATGAAGACATCAGGTACTATTGAATTTCATGAGGAGAATAATGATGAAGGAGCAGGATGCATGTGGGGCATGCTTAACATTCTTGATTACCATCATTGGCTTAATATCAGAAATGTGTTCCCCCTCAAAAGGCACCATTACCCTGCAAGACTTGCCACATATAAGAGAATAAGCATTTTGCATAGCCATTGGGGAGACCAACAAATTGGTGATGAAGAAACAGAACCCCTCTTGTTATATACACAGCAGGCTAGGCAACATGAACAAAAGTGCAGTGCTAAAGGCAAAAGTTCTTCCAAGATCAGCAATAGAAGATCACAAAGTGAAGATATGGAAGCAAAGAAGCTTAATAGAGATACTCCCATTAATTCTAAGAGGCATTCTGATTCTTTGGATGTACTTGGAGTGGAGAAGGATTTGATATTCAAATTTTTACGTGATCTTAATGTTGGTGGGGAAAATTTTCAACTTCAAGTGGCTTTCAATAATAACAAAGCGAGTTTGAAAAAATCAGGTTCAGTTCCTCAGACATCACAGATGAGAAGCATTACTAGTCCTACCACCTTTGAACACAAGCAAAGCGAAATTCGGCCTTTCCACAAGAAGAACAAGTTGCTTTTTGCATCCATTAAACAAAAGCAAAGATTTTCTTCCTCTTCAAGTAATCATCCTCAAGGTTTGAATCACAGAGGGTGGAACCAATTGGTTCTTTATCGTTTCAAGGTTATTAAACAGAAGATTAAACATGTTTTTATGGAATTCAAGAAAAGTGGCTATCAAACTTCTGCTGAAGCTATCCACCAGCATAGAGCTTCATCTGAATATGGCATCACCAATAATGAGAATGAAATCTCAGATGAGAGTAAAGTCTTTAGTTATGATTCCAGCAGACGCGAATTTCGCGGCTGCAGGAGAAGAGAATCATCTCTTAATGAGTCTCTTGATAGATACACTCAGTTGTTTGAGACAAGCTTTGGCAAAGACATCAAGTGTCATGGCTCAATAATGTCTAGAAGCTTAAAATTGCCAAATGAGGATAAGAATAATAGCATGAATTTGTGTCGGTATCCTCCTAAGGCTTCTAGAAGGAACTTGTCTCTGCCTAATCTTGATTCTTTCAGCTTCTTGATTCTACATGAGGCACTTTCTGATGCAAATGATGTGAATGCTGTTCCTTTATCTGACAAAACTATTGAGAGAAACAATGGGGAAGATGATGTATCATTGGACACTCATGAGCCTGCTTTAGAAGATGGAAGTTTTCCCCAAGAACAAGAACAGGTGCAAATAATTATGGCCAAGGAGGCCATAGCAACAATTGAAAGCAGTGATATAGAAGGTAGAGAACTAAATACAAGGGATTCTAGCATGGATGAATTGGAGATTGAATTATCAAATAACACAAATGCAACAGCAGAAGATGAAGAAATTGATTCCAATTTCAAATATGTGAAGCATGTTCTTGAGTGTCTAGGCCTCATGGGAAATGAGGAGAACATTGTTCAACTGTGGCACACATTAGATCAGCAACTAATTGATGCATCTTGGTTCCATGAAATTGAATCCAATGAAGAAGATACTGTCATATCCAATCATCATCATCATCTTCTTGTTTCTAACTTAGTAAAAGAGGTGGTGCTCCAAATACATGAGACATCATCAACTTACTCCACAATAATCCACAAGGGGCAACATCTTCTTAATGAAGTATGGATTAGAGTGCAGTCATACCTGAGATTGAGGCCAGAGCTAGATGAGACATTAGATGATGTTGTTGGTCGAGATTTGGCCAAGAAAAATGGGTGGATGATCCTCAAGCATGTAGAGGAGCGTGTAGCACTTGAACTAGAAGAGATTATTTTCAAAGATTTATTAGATGAAATAATAATCTTCACATGA 1926 0.3806 MGKKHSVSCMKTSGTIEFHEENNDEGAGCMWGMLNILDYHHWLNIRNVFPLKRHHYPARLATYKRISILHSHWGDQQIGDEETEPLLLYTQQARQHEQKCSAKGKSSSKISNRRSQSEDMEAKKLNRDTPINSKRHSDSLDVLGVEKDLIFKFLRDLNVGGENFQLQVAFNNNKASLKKSGSVPQTSQMRSITSPTTFEHKQSEIRPFHKKNKLLFASIKQKQRFSSSSSNHPQGLNHRGWNQLVLYRFKVIKQKIKHVFMEFKKSGYQTSAEAIHQHRASSEYGITNNENEISDESKVFSYDSSRREFRGCRRRESSLNESLDRYTQLFETSFGKDIKCHGSIMSRSLKLPNEDKNNSMNLCRYPPKASRRNLSLPNLDSFSFLILHEALSDANDVNAVPLSDKTIERNNGEDDVSLDTHEPALEDGSFPQEQEQVQIIMAKEAIATIESSDIEGRELNTRDSSMDELEIELSNNTNATAEDEEIDSNFKYVKHVLECLGLMGNEENIVQLWHTLDQQLIDASWFHEIESNEEDTVISNHHHHLLVSNLVKEVVLQIHETSSTYSTIIHKGQHLLNEVWIRVQSYLRLRPELDETLDDVVGRDLAKKNGWMILKHVEERVALELEEIIFKDLLDEIIIFT 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181309g00005 641 MobiDBLite consensus disorder prediction 112 136 - -
Stsc181309g00005 641 MobiDBLite consensus disorder prediction 177 204 - -
Stsc181309g00005 641 Pfam Domain of unknown function (DUF4378) 490 636 IPR025486 -
Stsc181309g00005 641 MobiDBLite consensus disorder prediction 97 136 - -
Stsc181309g00005 641 MobiDBLite consensus disorder prediction 177 201 - -
Stsc181309g00005 641 PANTHER PROTEIN TRM32 21 121 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181309g00005 Stsc-Chr181309 26024 28375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181309g00005 129 630 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 26.316 3.25e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181309g00005 - - aip:107629102 934.095