Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181309g00004 ATGGGAAACGGCATAGGGAAGCTCACGGTGTGCTTCAGCGGTGGCGGAGGAGGACGCCGCCGCAAGCACGACATATCCATCGTACTTACAGAGCCACTCGACGAGGGTCTGGGTCACTCGTTCTGCTATGTTAGGCCCGACCCGACCCGAATTTCGTCTTCGAAGGTTCACTCTGAAGAAACCACCACTTTCCGAACAATCTCCGGCGCCTCCGTGAGCGCCAACACATCGACGCCACTCTCAACTTCCTTCGTGGATCTCTACTCGTACGGCTGCATCGATAGAGCTGCGGCTTTCGAGAGCTCAACCTCCTTCGCCGCGCTTCCTCTTCAACCCATTCCGAAGGGGTTCATCAATTCGGGTCCTTTTTCCGGTAACTTAAACGGGTTTCCTGCATCGGGTCCTCTTGAGAGAGGCTTCATGTCAGGCCCGATTGAGCGTGGCTTCATGTCGGGCCCAATCGACCGGGCCGGGATTTTCTCGGGCCCGATGGATAGGGACAGTTCCGATCAGTTTCAGAGAAGCTTCTCTCATGGCGGCTTGAGTTCGGGTCTTGGGATCCGACCCGGAACAAGGAAGGCCCGGTGGATTCGGATGCTCCGGAGGGCGATTTCGAAGACCCTTCGGCAAGGCTCGATCGTGGCTCCGATCAAAGGGGTGGCGCCGGCGGGGAGGGAGCCGCCGGAGTGGGTTATTGCGGCGGCGGAGAAGCAGAACGAGAACACGGTGAACAGCGTGAATTTCAGCAGCGAAGGGAGCTTCTTGGAGGACGATGATTCAACTACGGCGGCGATGGAGGGTCACCAGAACGTTCAGTGGTGTCAGGGGAAAGCAGGGGAGGACCGTGTCCACGTGGTGGTGTCGGAGGAGCACGGTTGGGTTTTTGTTGGGATCTATGATGGATTCAACGGCCCAGATGCGCCCGACTACTTGCTTTCGAATCTGTACAACGCAGTGCACAAGGAGCTCAAGGGTTTGCTTTGGGATGATGGGGTTGATGGCAATTCCAATTTGGGGGCTAAAGATTCGATCTTGACAACTGGGGATGATGATACCGATGCTTGTGCTGGTTGTGTTGATCACCAGAATAATAATAATTTGAATGATGAAGATGGGTCATCTTGTGCAAGTGGTTCTGTGGATGCTAATTTTGATGATCATGGTTTGAAGAGAAAAAAGCGTGGAAGTGGAAATGGAAGGAGTTCTAAGAACAAGTACAAAGGGGCTGCCAAGAAATGGGAGGAGAATCAGATGAGGTGGAAGTGCGAGTGGGATAGGGAAAGAGTTGAACTTGATCGGAGATTGAAGGAGCAGCTAACTGGATCCGATGCTCTTAGGAAGACGGAGGAGGGTTTCTTGGAGGTGGCGGATAAGATGGTGATGGAGAATCCTGAGCTTGCTCTAATGGGGTCTTGTGTTCTTGTGATGTTGATGAAAGGTGAAGATGTTTATGTGATGAATGTTGGAGATAGTAGAGCTGTTCTTGCTCAGAAGGCTGAGCCTGATTACTGGCTTGGCAAGATTAGGCAAGACTTAGAGAGGATCAATGAGGAGACCATGAATGATCTTGAGTCTTGGGATGTTGATCGATCCACCTTGGTCCCTACTCTTACCTCCATTCAGCTCACCAAGGATCACAGCACCAATGTTGATGAGGAAATCCAAAGAATAAGAAAAGAACACCCGGATGATCCTTTCGCCCTTGTAAACGATCGCGTTAAGGGCTCTCTCAAGGTCACTCGAGCATTCGGTGCCGGATTTCTCAAACAGCCCAAATGGAACAATGCACTGTTGGAGATGTTTAGAATAGATTATGTGGGAAGCTCTCCATACATAAGTTGCTTGCCATATCTGAAACACCATAGATTAGGGGCAAAGGACAAGTTTTTGATTCTATGTTCAGATGGGTTGTACCAATACTTGTCAAATGAAGAAGCAGTAGCTGAAGTTGAACTTTTCATCACATTGCAACCTGAAGGAGACCCTGCTCAGCATTTGGTTGAGGAAGTCTTATTTCGTGCTGCCAAAAAAGCTGGTTTGGACTTTCACCAATTGCTTGAAATTCCACAAGGTGATAGACGTCGATACCATGATGATGTCTCCATCATTGTTATTTCTTTGGAAGGAAGGATATGGAGATCATGTGTATAA 2151 0.5007 MGNGIGKLTVCFSGGGGGRRRKHDISIVLTEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTSFVDLYSYGCIDRAAAFESSTSFAALPLQPIPKGFINSGPFSGNLNGFPASGPLERGFMSGPIERGFMSGPIDRAGIFSGPMDRDSSDQFQRSFSHGGLSSGLGIRPGTRKARWIRMLRRAISKTLRQGSIVAPIKGVAPAGREPPEWVIAAAEKQNENTVNSVNFSSEGSFLEDDDSTTAAMEGHQNVQWCQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYNAVHKELKGLLWDDGVDGNSNLGAKDSILTTGDDDTDACAGCVDHQNNNNLNDEDGSSCASGSVDANFDDHGLKRKKRGSGNGRSSKNKYKGAAKKWEENQMRWKCEWDRERVELDRRLKEQLTGSDALRKTEEGFLEVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDRSTLVPTLTSIQLTKDHSTNVDEEIQRIRKEHPDDPFALVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGSSPYISCLPYLKHHRLGAKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHQLLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181309g00004 716 MobiDBLite consensus disorder prediction 386 408 - -
Stsc181309g00004 716 SUPERFAMILY PP2C-like 276 708 IPR036457 -
Stsc181309g00004 716 FunFam Protein phosphatase 2C 29 249 714 - -
Stsc181309g00004 716 Pfam Protein phosphatase 2C 378 663 IPR001932 -
Stsc181309g00004 716 SMART PP2C_4 262 705 IPR001932 -
Stsc181309g00004 716 CDD PP2Cc 421 707 IPR001932 -
Stsc181309g00004 716 PANTHER PROTEIN PHOSPHATASE 2C 259 705 IPR015655 GO:0004722|GO:0006470
Stsc181309g00004 716 Gene3D - 235 712 IPR036457 -
Stsc181309g00004 716 ProSiteProfiles PPM-type phosphatase domain profile. 262 707 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181309g00004 Stsc-Chr181309 15472 18159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181309g00004 1 716 PP2C-type Phosphatase Gene Family AT1G07630 64.075 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181309g00004 - - aip:107629103 1379.39