Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181308g00016 ATGGCGTCGTCCAAGCTGATGGCGTCCACAAATTCTAGAAACCCCGATCCCCCACTACCGCTACAACGACAACCATCCTCTTCCCCAAAACCCCAACAATTCACTACCACCAACTTCATCCCAATGCCCGAAGATCCCACCCTCCTTGAAGCCCAAATTTCCCTCCTTGACGTCCCCGACCCCGCCCCCGCCTCTGCCAAAACGGTCGATGACGTCTGGCGGGAGATCGTCGCCGGAGAGCGCCGCGAGTGCAAGGAGGAGGCTCCCGAAGAGATGATGACGCTCGAGGACTTCCTTGCCAAGGCTGGTGCGGTTGACGAAGTCACCGACGTTGTTCCCATGGACGAGGAGGTGAAGATGCCGATGGCGCTGACGGAGAGGCTGAGCAGCGGTGGCGGCATGTTTTCGTTTGATCCACTGCCGACGACGCCGTTTCAGGGGATGGAGAACATGGAAGGGTCAGTTATAGGGTTCGGGAATGGCGTGGAAGTGGTTGAAGGTGGCGTTGGCGGAGGAGCAGGAGGAGGGAGAGGGAAGAGGGGGCGTCCCGTTTTGGAGCCGCAGCTCGATAAGGCTGCGCAGCAGAGGCAGAGGAGAATGATCAAGAACAGAGAATCTGCTGCTAGGTCTAGAGAACGAAAGCAAGCCTATCAAGTTGAGTTGGAGTCATTGGCAGTGAAGCTAGAGGAGGAAAATGACAAGCTAATCAAGGAAAAGGCCGAGAAGAAAAAGGAGAGATACAAACAGCTTATGGAAAAAGTAATTCCTGTTGTGGTGAAGCGAAGGCCCCCACGATTTCTACGTCGTGTTCGCTCCTTGCAGTGGTAA 828 0.5556 MASSKLMASTNSRNPDPPLPLQRQPSSSPKPQQFTTTNFIPMPEDPTLLEAQISLLDVPDPAPASAKTVDDVWREIVAGERRECKEEAPEEMMTLEDFLAKAGAVDEVTDVVPMDEEVKMPMALTERLSSGGGMFSFDPLPTTPFQGMENMEGSVIGFGNGVEVVEGGVGGGAGGGRGKRGRPVLEPQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLIKEKAEKKKERYKQLMEKVIPVVVKRRPPRFLRRVRSLQW 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181308g00016 275 Gene3D - 193 246 - -
Stsc181308g00016 275 MobiDBLite consensus disorder prediction 1 17 - -
Stsc181308g00016 275 SUPERFAMILY Leucine zipper domain 195 246 IPR046347 GO:0003700|GO:0006355
Stsc181308g00016 275 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 59 261 IPR043452 GO:0003700|GO:0045893
Stsc181308g00016 275 CDD bZIP_plant_BZIP46 195 233 - -
Stsc181308g00016 275 MobiDBLite consensus disorder prediction 26 42 - -
Stsc181308g00016 275 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 193 251 - -
Stsc181308g00016 275 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 245 IPR004827 GO:0003700|GO:0006355
Stsc181308g00016 275 MobiDBLite consensus disorder prediction 1 43 - -
Stsc181308g00016 275 Coils Coil 214 245 - -
Stsc181308g00016 275 SMART brlzneu 191 255 IPR004827 GO:0003700|GO:0006355
Stsc181308g00016 275 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 198 213 IPR004827 GO:0003700|GO:0006355
Stsc181308g00016 275 Pfam bZIP transcription factor 193 252 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181308g00016 Stsc-Chr181308 124092 126792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181308g00016 41 275 bZIP Transcription Factor Family AT5G44080 51.154 9.79e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc181308g00016 bZIP_1 6.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181308g00016 K14432 - qsa:O6P43_008088 255.758