Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181307g00001 ATGGAGTCAATCTCAGTCGTAGAAGACGACGATGAACGCGTTATCCTTCTTTGCACAGACCCCGATTCTCTTCAACCCCAAACTCCACACGAACAACACCTTCTCCTCACCACCACCGATATCCTCACCTGGAACTTGCCTAACATCCTCACTTTCAACACCCTCAAAGTTCAAGCACATCGCTCCAGGCTCATTGAGCGATCCTCCTATTTCCGTGGCCTACTCGGCCGGAGCTTCAGTGAATCGTGCTTAAGTTCAATCACTGTTAAATGGGATATCGGTGTATTTATCCACATTCTGAAGCATATCTATGATTGTGTAGTGGATGTTAATTCGGAGAATTTCCTCCCCCTTTATGAGGGTGCGTTTTATTTTGGAGTGGAAACACTGATATCGAAGTGTGAGACTTGGTTTGATGAGGTGTCCTCACCTGAAGGATTTCAGTCAGCACAATTGCCAATGGAGGACATGATTCGGATTTGGAAGTTTGGCTTAGAGCATGCTAGTGACTTCATTGTGAACTTGTGTGTGGGCTGCCTGGCAAGAAATTTTGTATGTACTCAACTTCTAGACACTATGGCTTGA 585 0.4547 MESISVVEDDDERVILLCTDPDSLQPQTPHEQHLLLTTTDILTWNLPNILTFNTLKVQAHRSRLIERSSYFRGLLGRSFSESCLSSITVKWDIGVFIHILKHIYDCVVDVNSENFLPLYEGAFYFGVETLISKCETWFDEVSSPEGFQSAQLPMEDMIRIWKFGLEHASDFIVNLCVGCLARNFVCTQLLDTMA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181307g00001 194 CDD BTB_POZ_ZBTB_KLHL-like 49 125 - -
Stsc181307g00001 194 ProSiteProfiles BTB domain profile. 46 112 IPR000210 GO:0005515
Stsc181307g00001 194 SMART BTB_4 48 142 IPR000210 GO:0005515
Stsc181307g00001 194 Pfam BTB/POZ domain 52 138 IPR000210 GO:0005515
Stsc181307g00001 194 SUPERFAMILY POZ domain 50 137 IPR011333 -
Stsc181307g00001 194 Gene3D Potassium Channel Kv1.1; Chain A 49 188 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Stsc181307g00001 BTB 8.5e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181307g00001 - - adu:107493902 337.035